Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1413 ATGGGCGTGTTTCCACCAAGGAACAATAATGCAACGTTCTCGTTTATTTTGCTTTTCTTTCTTCTGGTTCTACAAGACACAAACATCTTGCCCTCGGCTGCAGTTTCCAGAAGCAATGTTTACATCGTTTACATGGGAAAGAAGCAGCACGATGATCCAGGGCGCCTCACTGAACTCCATCACGAAACTCTCAAATCTGTCATAAGAAGAGAAGGATCCTCAGACTTAATGGTTTATAGCTACAAACATGGGTTCTCAGGTTTTGCGGCCAGGCTTACAAACACTCAAGCTAAAATGGCTGCAGAATTACCTAATGTTGTTCGAGTGATACCCAATCATCTTTATAAGATGCAAACTACCAGAAGCTGGGACTACCTTAAACTGCCTTCACATTCTTTCAACAGTCTTCAGCATCAAGCCAAGATGGGAGATAGTGTAATCATTGGTCTTCTTGATTCAGGTATATGGCCAGAATCCAAAGTTTTCTCTGATGAAGGTATGGGGCCAATCCCCTCTGGCTGGAGGGGTTTCTGTGAATCAGGAGAACTTTTCAACGCAGCAAAGAGCTGCAATAGAAAATTGATAGGAGCTCGTTATTTCATCAATGGGATCCAAGCCGAGTATGGAGAGCCATTAAATAATACTATATTATATGACTACTTGTCCCCAAGAGCTGCATCTAGCCATGGGACACACACCTCTACAATAGCTGCTGGGTCCTTCATCAATAATGCCAGCTACAATGGACTCGGTGCTGGAACAGTACGAGGTGGTGCTCCGCAGTCTCGGTTGGCAATGTATAAAGTCTGCTGGAGTTTGTATATAGGACAAGTGTGTGCAGCAGCTGACTTGCTGAAAGCCTTTGATGAAGCAATACATGATGGTGTAGATGTACTATCAGTGTCCATAGGCTCTGATCTTCCTTTATATTCTGATGTAGATGTGCATAATGGGATCACCGTGGGGGCTTTTCATGCCGTGGCAAATGGAATTAGTGTTATTTGTTCTGCAGGAAATGAAGGTCCAAATGCCCAAACAGTGCAGAGTCCTGCACCATGGATAATAACTGTGGCAGCAAGCACCATAGACCGCTCTTTCCCTACGCCTATCACATTTGGGAACAACTGGACAACATTGGGTCAAGCCATGTTTACAGGGGAGGATACAGGGTTCATCAATCTAGTGTACCCTGAGGTACCAGAGCTCCTAGATCCTCGTTACTGTGAATCTCTCTCACCAAATGACACTTGGGTAAGAAAAAGGGTGGTTTTCTGCTTCGTCTTCGATTATCAATACTATGCAACGCAGGATGTTGAATGGAATGTCAGAGAAGCTGGTGCTTTAGGAATTATTGTGGCCAGGAATCCCAGTTCAACACCTGATCCATGTGAATTTAATTTTCCATGTGTCCAAGTAAGCCATGAAATTGGAATGCAGATACTCTACTACATCCGTTCCACAAGGCATCCTAGAGTAAAGATTAGCCCTTCCAAAACACATACTGGCAGACCTGTGTCAACCCGTATAGCAGAATTCTCATCCAGAGGGCCTAGTTCTGTTGCCCCTGCAATACTGAAGCCAGATATAGCAGCTCCAGGTGTCAATATATTAGCAGCAGTTGCTCCCCATGATGGTTCCTCACGAGATACCATTTTTGCTTTTATGTCGGGAACTTCAATGGCAGCTCCTCATGTCTCAGGTGTAGTTGCACTACTCAAATCACTTCATCCAAATTGGTCACCTGCTGCTCTCAAATCAGCCATAATAACAACAGCTTGGACAACTGATCCATCTGGGGAACCAATATTTGTGGAGCAAGAGCCAATGAAGCTAGCAGATCCATTTGATTTTGGAGGCGGGATTGTGAATCCTAACAGGGCAGCAGATCCTGGTCTTGTCTATGACATGGACACAGCAGATTACGTTCAATACCTATGTGCCATGGGCTACAGTAACCCCAGCATTTCCTACCTAACGGAACTTCCCATCTCTTGCCCCATTGAAAAGCCCTCCATGCTAGACGTAAACCTGCCTTCCATAACTATTCCATCCCTTAGGAAGTCAACAACCATAGTAAGAACTGTCACAAATGTTGGACCTGCCAACTCAAAGTACAAGGCTGTTGTAGAGCCTCCCATTGGCATAACCATAGCAGTACGACCAGATACATTAGTATTCAACTCTACAATGAAGACCATAACCTTCAGCATTGTCGTTTCCTCAAGTCATCATGTGAGCACGGGATACCTCTTTGGTAGCTTGACTTGGTACGATGGTAAGCATGCAGTCAGAAGTCCAATATCTGTCAGAACTCAGATCACAGAATCATATGGTTAA 2337 0.445 MGVFPPRNNNATFSFILLFFLLVLQDTNILPSAAVSRSNVYIVYMGKKQHDDPGRLTELHHETLKSVIRREGSSDLMVYSYKHGFSGFAARLTNTQAKMAAELPNVVRVIPNHLYKMQTTRSWDYLKLPSHSFNSLQHQAKMGDSVIIGLLDSGIWPESKVFSDEGMGPIPSGWRGFCESGELFNAAKSCNRKLIGARYFINGIQAEYGEPLNNTILYDYLSPRAASSHGTHTSTIAAGSFINNASYNGLGAGTVRGGAPQSRLAMYKVCWSLYIGQVCAAADLLKAFDEAIHDGVDVLSVSIGSDLPLYSDVDVHNGITVGAFHAVANGISVICSAGNEGPNAQTVQSPAPWIITVAASTIDRSFPTPITFGNNWTTLGQAMFTGEDTGFINLVYPEVPELLDPRYCESLSPNDTWVRKRVVFCFVFDYQYYATQDVEWNVREAGALGIIVARNPSSTPDPCEFNFPCVQVSHEIGMQILYYIRSTRHPRVKISPSKTHTGRPVSTRIAEFSSRGPSSVAPAILKPDIAAPGVNILAAVAPHDGSSRDTIFAFMSGTSMAAPHVSGVVALLKSLHPNWSPAALKSAIITTAWTTDPSGEPIFVEQEPMKLADPFDFGGGIVNPNRAADPGLVYDMDTADYVQYLCAMGYSNPSISYLTELPISCPIEKPSMLDVNLPSITIPSLRKSTTIVRTVTNVGPANSKYKAVVEPPIGITIAVRPDTLVFNSTMKTITFSIVVSSSHHVSTGYLFGSLTWYDGKHAVRSPISVRTQITESYG 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1413 778 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 27 118 IPR037045 -
Dere05g1413 778 Pfam Subtilase family 143 595 IPR000209 GO:0006508|GO:0008236
Dere05g1413 778 Gene3D - 645 772 - -
Dere05g1413 778 CDD Peptidases_S8_3 115 593 IPR034197 -
Dere05g1413 778 Pfam Fibronectin type-III domain 674 769 IPR041469 -
Dere05g1413 778 CDD PA_subtilisin_like 370 494 - -
Dere05g1413 778 ProSiteProfiles Serine proteases, subtilase domain profile. 122 628 - -
Dere05g1413 778 Gene3D Peptidase S8/S53 domain 146 641 IPR036852 GO:0004252|GO:0006508
Dere05g1413 778 PRINTS Subtilisin serine protease family (S8) signature 556 572 IPR015500 -
Dere05g1413 778 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Dere05g1413 778 PRINTS Subtilisin serine protease family (S8) signature 225 238 IPR015500 -
Dere05g1413 778 FunFam Subtilisin-like protease SBT1.5 145 374 - -
Dere05g1413 778 Pfam Peptidase inhibitor I9 40 117 IPR010259 -
Dere05g1413 778 Gene3D - 363 501 - -
Dere05g1413 778 SUPERFAMILY Subtilisin-like 118 632 IPR036852 GO:0004252|GO:0006508
Dere05g1413 778 ProSitePatterns Serine proteases, subtilase family, serine active site. 557 567 IPR023828 -
Dere05g1413 778 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 41 769 IPR045051 -
Dere05g1413 778 FunFam Subtilisin-like protease SBT5.3 30 118 - -
Dere05g1413 778 FunFam Subtilisin-like protease SBT1.5 645 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1413 Dere-ChrDere05 23175381 23179168 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1413 17 777 Subtilisin-like Serine Gene Family AT4G10540 55.729 0.0 860