Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere05g1411 | ATGGGTGAGGTGGTGTTGAGTGCTGGGAAGGTTCTGGAAGCGAAGGAGGCAGAGAGCAAGATCCACAAGCAGAAGGGCAGGTCAGAGGAGGAAGGGTACGGAACAGAGAGTAGAGGTGACGAATTGAATAATGGATTGATGAGGTGGGAGAAGTTCTTGCCCAAGATGATATTGAGGGTGCTATTGGTTGAAGCTGATGATTCCACCCGGCAGATTATAGCGGCGCTTCTCAGGAAATGCAGCTATAAAGTGGCTGCTGTTTCTGATGGCTTGAAGGCGTGGGAATTACTGAAGGGAAGACCACGTAACGTTGATCTTATATTGACAGAAGTTGATTTGCCATCAATATCTGGCTATGCTCTTCTCACATTAATTATGGAGCATGAAATTTGCAAAAATATTCCTGTCATAATGATGTCCTCACATGATTCGATTAGCACGGTTTACAAATGCATGTTGAGAGGTGCTGCTGACTACCTTGTTAAGCCGCTAAGAAAAAATGAGCTGAGGAATTTGTGGCAGCACGTTTGGAGAAGACAATCTTCAACCTCTGGTGTAAAAGATCCCCAAGATGAGAGTGTTGCACAACCAAAGGTTGAAGCCACTGCTGAAAACAATGCTCCTGGTAATTATTCAAGCGGTGATGCTGCGTGCATTCAAAGAAATAAGGAATTAATTGAGAAAGGAAGTGATGCTCAGAGCTCTTGTACAAAGCCTGAATTGGAAGCTGAGAGCGCTGCCGCCATGGATCATGATGTGGGTGAATCTCCCCAATTAAAGCATGGTGAAATACACCCGAATAAAACAAAGATGCAGGAGGTTGAAATGTGCATTCATTTGGGCCAGACATTGACCATGCATGATGGTCAGGCTGGAGGATTAACTGTTAGGATCTGCAAAAATGGTGAGGCAAATTCAGCTTATGGCAAGGATAATGATCCAGAAGATTTTAGGAGTCCTGATACCGGTGGGGAGGCTTGCAGTAATCACTATGTTCAAATTACCTCTTCGAAGGAAGCTATTGACTTGATTGGAGCATTTCAAAATCATCCAAATTGCAGTCACATTAGTTCCTCAGTTAATTGCACTGGCAAGTTTGACTTTTCTCCACAGCTGGATCTTTCCTTAAGAAGATGTCACCCCGGCAACTTTGAGAATGAAGTCACTGAAGAAAGGCATACCCTGATGCACTCTAATGCCTCAGCTTTTAAGCGGTATACTAGCAGGCAAAGACAAGCCCCACCTGCAGTGTTCATTAATTGCTGCGATCAAGAAAGAGAACAGGGAGCAAATTGTGAGAAGAATATCTCCAATATTATGGGCTATAACTCTGACAGTTCAACACCTAGTATGCAAAGATGCATTGTGTCACCAGCTACACCGCAGTCAAAAGAATCTGAACTCACAACTTCACCCTCTCGGCCTAGGCCTTCTATCCCAAGTCCAGTGAAAGTTATTAGGTACAGTGATCTATGCACAGCCTATGGTTCTGTACTTCCTCCAATGTTTTGTACACAATCAGCTCCTCCATCAACGCCAAGTCCAGGCTCGGTTCCACACCATGAGCCAACCCTTCAAGTGAATGCTTTTTATCAGTCAAATACCAAAGAAAGCAGTTCAGAGCAGCTTTCTGAGTCTCAAGGTCAAAACGGAAACATCACAACAAACCAGATTGTGTACATGAAGGAAAACAAATTAGAACATGTGGAGGATCCAAGACATATCTCCCCTACAACCGGTCAAAGTGCATGCAGTAACATCAATGTTGACCAAGTTGCTATTGTCAGGACAGCTACAGAGAGCAAGAATGCGGACGTCACAAATAATGGGAGTTCTCAACGATCTATCCAAAGAGAAGCAGCTCTAAACAAGTTCCGCTTGAAACGAAAAGAGAGATGCTTTGAAAAGAAGGTGCGCTATGAAAGCAGAAAGAAACTTGCAGAGCAGCGTCCTAGAGTGAAGGGGCAGTTTGTTCGCCAAGTACAGCAGGATCTCCCAGCTGCAGAAAAAGAAGAAGACTATGATCATTAG | 2031 | 0.4412 | MGEVVLSAGKVLEAKEAESKIHKQKGRSEEEGYGTESRGDELNNGLMRWEKFLPKMILRVLLVEADDSTRQIIAALLRKCSYKVAAVSDGLKAWELLKGRPRNVDLILTEVDLPSISGYALLTLIMEHEICKNIPVIMMSSHDSISTVYKCMLRGAADYLVKPLRKNELRNLWQHVWRRQSSTSGVKDPQDESVAQPKVEATAENNAPGNYSSGDAACIQRNKELIEKGSDAQSSCTKPELEAESAAAMDHDVGESPQLKHGEIHPNKTKMQEVEMCIHLGQTLTMHDGQAGGLTVRICKNGEANSAYGKDNDPEDFRSPDTGGEACSNHYVQITSSKEAIDLIGAFQNHPNCSHISSSVNCTGKFDFSPQLDLSLRRCHPGNFENEVTEERHTLMHSNASAFKRYTSRQRQAPPAVFINCCDQEREQGANCEKNISNIMGYNSDSSTPSMQRCIVSPATPQSKESELTTSPSRPRPSIPSPVKVIRYSDLCTAYGSVLPPMFCTQSAPPSTPSPGSVPHHEPTLQVNAFYQSNTKESSSEQLSESQGQNGNITTNQIVYMKENKLEHVEDPRHISPTTGQSACSNINVDQVAIVRTATESKNADVTNNGSSQRSIQREAALNKFRLKRKERCFEKKVRYESRKKLAEQRPRVKGQFVRQVQQDLPAAEKEEDYDH | 676 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere05g1411 | 676 | Pfam | CCT motif | 618 | 660 | IPR010402 | GO:0005515 | |
Dere05g1411 | 676 | MobiDBLite | consensus disorder prediction | 443 | 474 | - | - | |
Dere05g1411 | 676 | ProSiteProfiles | CCT domain profile. | 618 | 660 | IPR010402 | GO:0005515 | |
Dere05g1411 | 676 | SUPERFAMILY | CheY-like | 58 | 185 | IPR011006 | - | |
Dere05g1411 | 676 | ProSiteProfiles | Response regulatory domain profile. | 59 | 177 | IPR001789 | GO:0000160 | |
Dere05g1411 | 676 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 59 | 261 | IPR045279 | GO:0009736 | |
Dere05g1411 | 676 | Gene3D | - | 56 | 283 | - | - | |
Dere05g1411 | 676 | SMART | REC_2 | 58 | 173 | IPR001789 | GO:0000160 | |
Dere05g1411 | 676 | MobiDBLite | consensus disorder prediction | 199 | 214 | - | - | |
Dere05g1411 | 676 | Pfam | Response regulator receiver domain | 60 | 171 | IPR001789 | GO:0000160 | |
Dere05g1411 | 676 | MobiDBLite | consensus disorder prediction | 17 | 37 | - | - | |
Dere05g1411 | 676 | MobiDBLite | consensus disorder prediction | 644 | 676 | - | - | |
Dere05g1411 | 676 | MobiDBLite | consensus disorder prediction | 534 | 553 | - | - | |
Dere05g1411 | 676 | CDD | psREC_PRR | 60 | 163 | - | - | |
Dere05g1411 | 676 | MobiDBLite | consensus disorder prediction | 443 | 482 | - | - | |
Dere05g1411 | 676 | MobiDBLite | consensus disorder prediction | 17 | 39 | - | - | |
Dere05g1411 | 676 | MobiDBLite | consensus disorder prediction | 180 | 214 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere05g1411 | Dere-ChrDere05 | 23159877 | 23164143 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere05g1411 | 339 | 662 | Response Regulator Gene Family | AT5G24470 | 36.228 | 5.32e-34 | 135 |