Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1405 ATGACATTTGGGGACTTGCATAGTTGCATTGGACTGAGATCTCAAGGACACCCTTTGAAGAATTCAACACCACCCACCCCCTCTTCTACCCTGAGGACATCTCGTAACTCTGACACAGAATCTGTTATTTGTTTTTCGGTCTTTTTGTTCAATTTTGTGACTTTTGGTCGGAACTTCTTATTCGCGATGATTTGCTCTCTCAAACAACCTGGTATATCTTTCAGTAGTTCCGATGTTGTTCTTCGGAGAAAACGCTCAAATTCCATTCAGTCAAGCTTGCTTTTGCCTTCTATACCGAAGGAAAAGGCTCAGCGATCTCTGGTTTCAGTACACAAACCCTTGCACCTGTCTTCTACAGCCAAGAATTTTTCATCGGTGAATCTTGCGTCGGCGAAGCCTCGTCGAAATTCGATCAGATGCGAAGCTTACGAGGCTGACCGATCGAACATTGAAGCAACCACGCCATCAGAGGCAGCGAAGAAGTTGAAAATTGGAATATATTTCGCAACGTGGTGGGCTCTGAACGTGGTCTTCAATATTTATAACAAGAAGGTTCTAAATGCGTATCCGTACCCTTGGCTTACTTCGACGCTCTCACTCGCATGTGGGTCTCTTATGATGCTGATTTCTTGGGCCACGAGGATAGCGGAGGCGCCTAAGACTGATTTTGAGTTTTGGAAGACTCTGTTTCCGGTTGCTGTTGCTCATACTATTGGACATGTCGCTGCAACCGTTAGCATGTCAAAGGTTGCAGTTTCATTCACCCACATCATCAAGAGTGGTGAACCTGCATTCAGTGTACTGGTTTCGAGATTTCTTCTTGGGGAGACCTTCCCAGTGCCAGTCTATCTGTCCTTAGTTCCAATCATCGGTGGATGTGCACTTGCTGCTGTGACTGAGCTCAATTTCAACATGACTGGTTTTATGGGTGCCATGATATCAAATTTGGCATTTGTATTTAGGAACATCTTTTCCAAACGGGGCATGAAAGGAAAGTCTGTTAGCGGAATGAACTACTATGCTTGTTTGTCTATATTGTCTCTAGTTATTCTTACACCGTTCGCAATTGCTGTTGAGGGACCACAGTTGTGGGCAGCTGGATGGCAAACAGCCCTCTCTCAAATTGGACCCCAATTTATATGGTGGGTGGCGGCTCAGAGTGTGTTCTATCATCTGTATAATCAGGTATCATACATGTCTCTCGATGAGATCTCTCCCTTGACGTTTAGCATTGGGAACACCATGAAACGTATATCTGTCATAGTCTCCTCCATCATCATCTTCCACACACCAGTTCAGCCCATCAACGCCCTCGGAGCTGCTATCGCAATCCTTGGAACCTTCTTGTATTCACAGGCAAAGCAGTAG 1368 0.4525 MTFGDLHSCIGLRSQGHPLKNSTPPTPSSTLRTSRNSDTESVICFSVFLFNFVTFGRNFLFAMICSLKQPGISFSSSDVVLRRKRSNSIQSSLLLPSIPKEKAQRSLVSVHKPLHLSSTAKNFSSVNLASAKPRRNSIRCEAYEADRSNIEATTPSEAAKKLKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEAPKTDFEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLVPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKRGMKGKSVSGMNYYACLSILSLVILTPFAIAVEGPQLWAAGWQTALSQIGPQFIWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAKQ 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1405 455 MobiDBLite consensus disorder prediction 15 34 - -
Dere05g1405 455 MobiDBLite consensus disorder prediction 14 34 - -
Dere05g1405 455 SUPERFAMILY Multidrug resistance efflux transporter EmrE 205 298 - -
Dere05g1405 455 Pfam Triose-phosphate Transporter family 162 451 IPR004853 -
Dere05g1405 455 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 162 454 IPR004696 GO:0016020|GO:0022857|GO:0055085
Dere05g1405 455 PANTHER SOLUTE CARRIER FAMILY 35 163 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1405 Dere-ChrDere05 23080203 23084513 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1405 63 454 Antiporters AT5G54800 76.559 0.0 586