Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1403 ATGCGGGAGCCGGGAGGTGATTATGGATCAAGCTACATCGCCCTGAGATCTATATGGCAACGAGCTTTAGGGCTCAGGGTAAGATCCTACCTTCTGTTTCCACTGTTCTCTGACACACTCTACCCGCAACCAAACAGATTGAAGAAGGGTCTGTTTTCCAATTCGTTTGAATTTTCATTTGGAATTCATTTCCTTCGATCAGGATCCGGTACAATCGACATGGGTTTCGTGGTAACAACCCTAATTTTCGTGGTGATTGGAATAATTGGTTCGCTTTGTACCCGAATTTGCTGCAACATAGGACCTTCTACTAATTTATTACACTTAACTTTGGTTATTACTGCAACAGTATGCTGCTGGATGATGTGGGCGATTGTATATCTGGCACAGATGAAGCCGCTCATTGTACCCGTCCTGAGTGAGGGAGAATGA 432 0.4444 MREPGGDYGSSYIALRSIWQRALGLRVRSYLLFPLFSDTLYPQPNRLKKGLFSNSFEFSFGIHFLRSGSGTIDMGFVVTTLIFVVIGIIGSLCTRICCNIGPSTNLLHLTLVITATVCCWMMWAIVYLAQMKPLIVPVLSEGE 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1403 143 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT H 74 141 IPR008389 GO:0033179|GO:0046961|GO:1902600
Dere05g1403 143 Pfam ATP synthase subunit H 76 140 IPR008389 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1403 Dere-ChrDere05 23034792 23036919 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1403 74 143 Primary Pumps ATPases(2) AT5G55290 85.714 1.43e-39 126