Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1374 ATGGCGAATTTGCCCCAATCTCTCTCCATGAATGCCCCCTTTGGAGCTCCGGGTGCCTCCGCCCAGAACGCCGCCGCTTCTCAGGCCAACAAGGATCGCAAGATGGCGTCTGCGGAGCATCTCGTTCTCGAACTGAGCAACCCTGATCTCCGAGAAAATGCCCTTCTTGAGCTCTCTAAGAAGAGGGAGTTATTTCAAGATCTGGCACCATTATTGTGGAATTCTTTTGGTACTATTGCTGCACTTTTACAGGAAATAGTATCAATATACCCAGTTCTTTCTCCGCCAAATCTTACTCCAGCACAATCAAATCGAGTTTGCAATGCTCTTGCACTTCTTCAGTGTGTTGCATCTCACCCGGATACAAGGATGCTATTCCTCAATGCCCATATACCCCTATATCTGTATCCTTTCCTTAATACAACAAGCAAATCAAGACCATTTGAGTACTTGAGGCTTACTAGTCTAGGAGTCATTGGTGCCCTGGTGAAGGTTGATGATACAGAAGTTATCAGTTTTCTTCTTTCAACAGAAATAATTCCACTGTGCCTGCGCACCATGGAAATGGGCAGTGAATTGTCAAAAACAGTTGCAACATTTATAGTTCAAAAAATTTTATTGGATGATGTGGGCTTGGATTATATTTGTACTACAGCAGAGCGCTTCTTTGCAGTTGGCCGAGTTCTAGGGAACATGGTGGCATCTCTTGCTGAGCAACCCTCATCTCGTCTGTTGAAACATATTATCCGCTGCTATCTTCGTCTGTCAGATAATCCAAGGGCTTGTGATGCATTAAGAAGTTGCCTTCCAGACATATTAAGAGATGCTACTTTCAGCAGTTGCCTTCGTGAAGATATAACAACCAGGAGGTGGCTGCAGCAATTGCTTCACAATGTTGGAGTGAGTAGGGTTCCTGCGCTTCAGGCTGGAGGAGGTTTTGATCACATGATGGTGAATTGA 960 0.449 MANLPQSLSMNAPFGAPGASAQNAAASQANKDRKMASAEHLVLELSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVASLAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDILRDATFSSCLREDITTRRWLQQLLHNVGVSRVPALQAGGGFDHMMVN 319
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1374 319 SUPERFAMILY ARM repeat 43 269 IPR016024 -
Dere05g1374 319 Gene3D - 29 300 IPR011989 -
Dere05g1374 319 PANTHER UNCHARACTERIZED 28 302 IPR007216 GO:0006402|GO:0030014
Dere05g1374 319 FunFam Cell differentiation protein RCD1 31 302 - -
Dere05g1374 319 Pfam Cell differentiation family, Rcd1-like 41 299 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere05g1374 Dere-ChrDere05 22599562 22604563 Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Dere05g1374 Rcd1 5.2e-129 No_clan