Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1365 ATGGAAGCAAATTCTTCTTCTCCCCCCAAGCGACTCCTCATCCGTGAGATGGATTTCTTCTCTGACAAAAAGACAAAGAGTGATAAACATGATCTTGATCATGATCAGATGGTGCACTCATCAATGGAGCTTCACGTTGATGCTAGTTTAGATCTTGTCACTAAGACCAGTAGCAACAGATCGACTGTGACTGATGGAGCATCAGAGGCCACGGATGATGATAGGAGAAAAGAGGCACGCGATCGATCACTTTCTGTCTATAATCGATATATTTTTGCAGCTTTGGTGGCTGAAGTGCAGCAGTTGAATGCTGAAAATCAACGTTTGAGAGAGTGTCTTCATCAGGTGAACCACAACTACAATACCCTACAAATGCAACTTATCAAGCTCAAGCAGACGCAGCACAGTAATGGGGTAGAAGAGGGCACATGTGAGATGGGAAGGAAAGGAGGTATGATATTAAGGCCATTCATGGATATGAGTGTTGGTGATGAAAATGAAGGTAAACTGATCAGAGAAGGCAAAAGAATGATTGACTTGATGGAGTGCAAGACTGAGCAGAACAGAGATATCGTTCAGTTTGAAACAGATCATGATCTTCTTAAGACAATTAATGGGAAGGATCGTAGTGACGCAGAAGCCACGTCAGAAACCATGTCACTGATCAAGAAAGCTCGTGTATCAGTTCGAGCACGATTAGAGTCTTCAATGATATCTGATGGATGCCAATGGCGAAAGTATGGGCAGAAAATGGCAAAGGGAAACCCATGCCCGCGAGCTTATTATCGTTGCTCTATGGGAGCTGCTTGTCCAGTACGAAAACAAGTACAGAGGTGTGCCGAAGATAAAAGCATTTTGATAACTACATATGAAGGGCAACACAACCACCCACTCCCTCCTTCTGCCAAAGCAATGGCGTCCACCACATCTTCAGCTGTCTCAATGCTTCTTTCAGGATCAACACAAAGCGCAGATAATCATCATCACCATCTTCTTCTTCATCACGACCTAAGAAACCTTAACATATTAGACAGTGCTTCAATACTACGTCCATCCCCATACAACTTGGCTACCCTCACAGCCTCAGCTCCATTTCCTACTATTACATTGGACCTCACTCGTCATCAAACTACCACCTCGTCCCCAAGCCCACAAAAGTCCCCACCAAAACTTTTTGGGCAGGCTTTGAGCGAACAAACTAGGGTTTCTCAGGGATCGACGTCGTTTGTTGACACAGTAAATGCAGCAACTTCTGCTATTACTGCGGATCCGAACTTCACAGCAGCTCTCGTGGCTGCCATAACTTCAATCATTGGAAGTTCCCATTCCAACAGTGATAATGGTACTGATATTACTACAAGTGGAAAACCATGA 1374 0.4425 MEANSSSPPKRLLIREMDFFSDKKTKSDKHDLDHDQMVHSSMELHVDASLDLVTKTSSNRSTVTDGASEATDDDRRKEARDRSLSVYNRYIFAALVAEVQQLNAENQRLRECLHQVNHNYNTLQMQLIKLKQTQHSNGVEEGTCEMGRKGGMILRPFMDMSVGDENEGKLIREGKRMIDLMECKTEQNRDIVQFETDHDLLKTINGKDRSDAEATSETMSLIKKARVSVRARLESSMISDGCQWRKYGQKMAKGNPCPRAYYRCSMGAACPVRKQVQRCAEDKSILITTYEGQHNHPLPPSAKAMASTTSSAVSMLLSGSTQSADNHHHHLLLHHDLRNLNILDSASILRPSPYNLATLTASAPFPTITLDLTRHQTTTSSPSPQKSPPKLFGQALSEQTRVSQGSTSFVDTVNAATSAITADPNFTAALVAAITSIIGSSHSNSDNGTDITTSGKP 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1365 457 SMART WRKY_cls 238 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere05g1365 457 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 52 445 IPR044810 GO:0003700
Dere05g1365 457 FunFam probable WRKY transcription factor 31 223 300 - -
Dere05g1365 457 ProSiteProfiles WRKY domain profile. 233 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere05g1365 457 Pfam WRKY DNA -binding domain 240 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere05g1365 457 Gene3D WRKY domain 223 300 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere05g1365 457 SUPERFAMILY WRKY DNA-binding domain 231 299 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere05g1365 457 MobiDBLite consensus disorder prediction 57 79 - -
Dere05g1365 457 Coils Coil 92 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1365 Dere-ChrDere05 22347035 22350442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1365 16 442 WRKY Transcription Factor Family AT1G62300 38.477 5.60e-80 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere05g1365 WRKY 9.9e-24 CL0274