Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1327 ATGTTTGGTACAGTTGAATCAAATCCTTTTACATTTGGGTTCCGGAGCTGTCATCAAAAAAGGTACATGGTTGATTTGGAGGTTGAGATCCTCACTCCCTTTGATCCATTTGCAGAGGCTAAAGAAACTGATGCCCCGGGAGGCAAGGAGTATGTGCATATCAGGATACAACAGAGGAATGGGAAGAAAAGCCTGACCACAGTGCAAGGCTTGAAGAAGGATTTCAGCTACGAGAAGATCCTTAAGGACCTCAAGAAAGAGCTCTGCTGCAACGGCAATGTTGTGCAGGACAAGGAGCTTGGCAAGATAATCCAACTCCAAGGTGATCAGCGGAAGAATGTCTCTCACTTCCTCGTTCAGGCTGGCCTTGTTAGAAAGGACCACATCAAGATTCATGGTTTTTGA 405 0.4568 MFGTVESNPFTFGFRSCHQKRYMVDLEVEILTPFDPFAEAKETDAPGGKEYVHIRIQQRNGKKSLTTVQGLKKDFSYEKILKDLKKELCCNGNVVQDKELGKIIQLQGDQRKNVSHFLVQAGLVRKDHIKIHGF 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1327 134 SUPERFAMILY eIF1-like 22 134 IPR036877 GO:0003743|GO:0006413
Dere05g1327 134 ProSiteProfiles Translation initiation factor SUI1 family profile. 52 122 IPR001950 GO:0003743|GO:0006413
Dere05g1327 134 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 30 134 - -
Dere05g1327 134 Pfam Translation initiation factor SUI1 49 122 IPR001950 GO:0003743|GO:0006413
Dere05g1327 134 CDD eIF1_SUI1 50 133 IPR005874 GO:0003743
Dere05g1327 134 NCBIfam translation initiation factor SUI1 28 134 IPR005874 GO:0003743
Dere05g1327 134 Gene3D - 14 134 - -
Dere05g1327 134 FunFam Eukaryotic translation initiation factor SUI1 24 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1327 Dere-ChrDere05 21796256 21796660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1327 23 134 Eukaryotic Initiation Factors Gene Family AT5G54940 77.679 1.78e-63 187