Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1311 ATGAATATCCTGCTCGCTACTTTCCTCTTCCTCATCTCGATCCTCCTTTTACTCACAAGAACCAGAAGAACATCACGAAGAGTCCCTCCAGGGTCACTGGGAATCCCCATTGTTGGCCAAAGCTTTGGTCTTCTGCGAGCCATGCGATCCAACACCGCCGAACAGTGGCTCCGGGAGAGAGTGGACAGGTATGGTCCGATATCAAAGATGAACCTGTTTGGGAAGCCTACGGTGTTCATATACGGACAGGCGGCGAATAGGTTTATTTTCGCCGACCACGGAGGCACCGTCGCGAACCAGCAGACGCAGTCCATAAGGTCGATATTGGGAGAACGGAGTCTACTGGAGCTGAACGGAGAAGATCACAAGCGCGTCAGAGGAGCACTTGTGCCGTTCCTGAAGCCGGAGTCGTTGAAGCGGTATGTGGGGAAGATGGATGAGGAAGTTAGGACGCACCTTGAGATGTATTGGCAGGGGAAACAGCAGGTCACGGTGTTGCCTCTGATGAAGACCCTCACATTCAACATAATCTGCTCTCTTCTGTTCGGTCTGGAGCGAGGAAAGCAAAGAGACCAATTCCTCTCTTACTTCGAAACCATGATCCAAGGAATGTGGTCAGTCCCCATCAACCTCCCCTTCACACGCTACAATCGCAGCCTCAGACAAAGCGCCAAAATTCAGAACATATTGAAGGAGCTCGTGCAGAAGAAGAAGATCGAACTGGAGCAAAATGGAACCTCTGCTCAACAAGACCTCATCACTTGCTTGCTTCGCATGCGAGACGAAGATGGAAAAGAAGTGATCACTGAGAAGGAGATTATTGAGAACGCCTTGCTTGTTATGGTTGCTGGACACGATACTTCTGCTGTTCTTATCACTTTCATTGTTCGTCTCTTGGCTAATGAGCCTGCTGTTTATGCAGAGGTTCTTAGAGAGCAGGAAGAGATAGCAAAAAGCAAGCTCCCAGGAGAGCCCCTTAGTTGGAAAGACCTTGCCAAGATGAAGTATTCCTGGAGAGTAGCTAGTGAAACCCTTAGGATGTTTCCTCCTGTCTTTGGTGGCTTCAGGAAGGCTGTGAAAGATATTGAGTATGGCGGATACCTTATACCCAAAGGGTGGCAAATCTTCTGGGTTACAGCAATGACCCACATGGACGATAACATGTTCCCAGAACCATCAAAGTTTGATCCAAGCAGATTTGAGAACCAATCATCCATACCACCCTACTGCTTCATTCCATTTGGAGGGGGCCAAAGAATATGTCCAGGATATGAATTTGCGAGGATCGAAACTCTGGTGGCAATCCATTATCTGGTGACTCGCTTCACTTGGAAGCTATGTGCAGACAATTTCTTCAAGAGAGACCCAATGCCAGTACCAACTCATGGCCTACCAGTTCAAATCTGGCCAAGGATACCATCTTAG 1425 0.4856 MNILLATFLFLISILLLLTRTRRTSRRVPPGSLGIPIVGQSFGLLRAMRSNTAEQWLRERVDRYGPISKMNLFGKPTVFIYGQAANRFIFADHGGTVANQQTQSIRSILGERSLLELNGEDHKRVRGALVPFLKPESLKRYVGKMDEEVRTHLEMYWQGKQQVTVLPLMKTLTFNIICSLLFGLERGKQRDQFLSYFETMIQGMWSVPINLPFTRYNRSLRQSAKIQNILKELVQKKKIELEQNGTSAQQDLITCLLRMRDEDGKEVITEKEIIENALLVMVAGHDTSAVLITFIVRLLANEPAVYAEVLREQEEIAKSKLPGEPLSWKDLAKMKYSWRVASETLRMFPPVFGGFRKAVKDIEYGGYLIPKGWQIFWVTAMTHMDDNMFPEPSKFDPSRFENQSSIPPYCFIPFGGGQRICPGYEFARIETLVAIHYLVTRFTWKLCADNFFKRDPMPVPTHGLPVQIWPRIPS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1311 474 CDD CYP90-like 60 470 - -
Dere05g1311 474 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Dere05g1311 474 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g1311 474 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g1311 474 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g1311 474 PRINTS E-class P450 group I signature 292 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g1311 474 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g1311 474 PRINTS E-class P450 group I signature 272 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g1311 474 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g1311 474 SUPERFAMILY Cytochrome P450 22 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g1311 474 FunFam Taxadiene 5-alpha hydroxylase 19 471 - -
Dere05g1311 474 PANTHER CYTOCHROME P450 26 27 459 - -
Dere05g1311 474 Pfam Cytochrome P450 29 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g1311 474 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g1311 474 PRINTS P450 superfamily signature 283 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g1311 474 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g1311 474 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g1311 474 Gene3D Cytochrome P450 18 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1311 Dere-ChrDere05 21451228 21455827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1311 27 442 Cytochrome P450 AT3G13730 32.381 1.60e-75 243