Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1300 ATGAGCTGCTTACCGTGCTGTACGTCGAAAGATAGGAGTAATCGGAGGGCGTTGCAGAAGAGCATTAAGGAGTACAATGATGCAAAATCTCTAGCCTCATTTGCCAACATTTCTTTTAAAAGTGATGCCAGCAGGCAAAGATACATAACGGACGAGATTAAAAAAATTGGAAAAGGGAATATTACTGCTAAAATTTTTGGCTATCGAGAGCTATGTGCTGCAACTCAGAACTTTCACCCGGACAACTTGATTGGAGAAGGAGGCTTTGGCAGGGTATACAAAGGACAACTTGAAAGCACTAATCAAGTTGTTGCTGTGAAACAACTTGACAGGAATGGGTTTCAAGGAAACAGAGAATTTCTTGTAGAGGTTTTGCTCTTGAGTCTCTTGCACCACCCCAACCTTGTCAATCTGATAGGGTACTGCGCTGACGGTAATCAGAGGATTTTGGTATATGAGTACATGGTCAATGGTTCTTTGGAAGATCACCTTCTTGAATTAACACCAGAGAGAAAGCCTCTGGATTGGAGTACCAGAATGAAAATTGCTGAAGGTGCAGCAAAAGGACTCGAATATTTACACGAAGTGGCGAACCCACCAGTGATATACCGAGATTTCAAGGCATCAAACATACTTTTGGATGAAAATTTCAATCCAAAGCTTTCTGATTTCGGACTCGCAAAGCTTGGTCCAACTGGGGATCACTCCCACGTGTCCACCAGGGTGATGGGAACTTATGGCTACTGTGCTCCTGAGTATGCACTCACAGGGCAGTTGAGTACTAAATCAGATGTGTACAGCTTTGGAGTGGTCTTCCTGGAGATGATATCTGGAAGAAGAGTGATTGATCATTCAAGACCAACTGAGGAGCAAAATTTAGTCATTTGGGCTCAACCACTACTCAAAGACAGAAGGAAATTCACATTACTGGCCGATCCATTGCTAGAAGAGGATTACCCCATAAAAGGGCTATACCAAGCTCTTGCAGTTGCAGCAATGTGTCTCCAAGAGGAACCTTCTACCCGGCCTTTGATCAGCGACGTAGTCACAGCTATGGAGTTTTTGGCTAAGAAGAATGTGGAAGCCGACGTAGGAGAAGAAGAAGATGAAGAACATATGTTTGATTCTTCTACTGAGGACGATGGAGACTGCAGTGTTGGAGGCTATGAATCTGATAGCATACTTAATCGTAAGAAACAAGACTGA 1206 0.4337 MSCLPCCTSKDRSNRRALQKSIKEYNDAKSLASFANISFKSDASRQRYITDEIKKIGKGNITAKIFGYRELCAATQNFHPDNLIGEGGFGRVYKGQLESTNQVVAVKQLDRNGFQGNREFLVEVLLLSLLHHPNLVNLIGYCADGNQRILVYEYMVNGSLEDHLLELTPERKPLDWSTRMKIAEGAAKGLEYLHEVANPPVIYRDFKASNILLDENFNPKLSDFGLAKLGPTGDHSHVSTRVMGTYGYCAPEYALTGQLSTKSDVYSFGVVFLEMISGRRVIDHSRPTEEQNLVIWAQPLLKDRRKFTLLADPLLEEDYPIKGLYQALAVAAMCLQEEPSTRPLISDVVTAMEFLAKKNVEADVGEEEDEEHMFDSSTEDDGDCSVGGYESDSILNRKKQD 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1300 401 Gene3D Phosphorylase Kinase; domain 1 50 154 - -
Dere05g1300 401 PANTHER OS07G0668900 PROTEIN 3 362 - -
Dere05g1300 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Dere05g1300 401 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Dere05g1300 401 CDD STKc_IRAK 84 353 - -
Dere05g1300 401 ProSiteProfiles Protein kinase domain profile. 78 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1300 401 SUPERFAMILY Protein kinase-like (PK-like) 64 358 IPR011009 -
Dere05g1300 401 Pfam Protein kinase domain 79 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1300 401 Gene3D Transferase(Phosphotransferase) domain 1 155 381 - -
Dere05g1300 401 FunFam Serine/threonine-protein kinase CDL1-like 49 154 - -
Dere05g1300 401 FunFam Serine/threonine-protein kinase PBS1 155 371 - -
Dere05g1300 401 MobiDBLite consensus disorder prediction 361 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1300 Dere-ChrDere05 21302992 21306944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1300 51 356 Glycoside Hydrolase AT3G07070 71.569 1.84e-161 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Dere05g1300 Pkinase 5.4e-48 CL0016