Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1282 ATGGTGGTAATGATACTCAATTGGGTATCGGACGCTACGAAGAATTTTGCTCACCAGCACGCGCTGGTGGTACCCATTTCGCTCTTCGTGGCGGTTCTCTGCCTCTGCTTGCTCATCGGTCACTTGCTCGAAGAAAACCGTTGGGTTAATGAGTCCATCGTCGCCATTCTAGTTGGATGCATTGCTGGAATGATACTCTTGTTTATTACCAGGGGGAAAAGTTCTCACATCCTTACATTCAATGAAGAACTATTCTTCATTTATCTGCTGCCACCCATAATATTCAATGCTGGATTTCAGGTCAAGAAGAAACAGTTCTTCCACAACTTTTTAACTATCATGCTGTTTGGGGTGATTGGTGTTTTTGTTTCAGCATTTATTATTACATCCGGCAGCTGGTGGCTATTCCCCAAGTTAAACTTTCTTGGTCTGACTGGGCGAGATTATCTTGCTATAGGAACGATTTTCTCTTCAACAGACACAGTTTGTACCCTGCAGGTTCTCCATCAAGATGAAACTCCTTTGCTATACAGCCTAGTCTTTGGGGAAGGAGTGGTAAATGATGCAACATCAGTTGTTCTCTTCAATGCAGTGCAGAAGCTTGATGTTTCAAAACTTAATGGTAGGACACTCCGAGTCATTGGAGATTTCTTGTATCTGTTCTGCACGAGTACTGCTCTAGGATTCATTGCAGGACTTCTCACAGCATTCATCCTGAAAGCGTTAAGCTTTGGAAGACATTCAAGTGTTCGTGAGATTGCACTGATGGTTTTAATGGCATACCTATCCTACATGTTGTCAGAGCTTCTAGAACTAAGTGGAATCCTCACTGTTTTCTTTTGTGGTATATTAATGTCACATTATGCATGGCACAATGTGACTGAAACTTCGAGAGTTACAACCAGGCATGTCTTTGCAACAATGTCTTTTATTGCAGAAACCTTTATATTTCTTTACGTGGGAATGGATGCTCTTGACATGGAGAAGTGGAGGATGACCAAATTGAGTTATGGGAGTTTGATGGGGATTAACAGTTGCTTAATCTTCCTGATATTGCTTGGGCGGGCTGCATTTATTTTCCCCCTCTCTGCTTTTGCCAATTGTTTGAACAGGCGAGCAGATAGAACCTCAAAAATTACAATGAGGCATCAGATAATCATTTGGTGGGCTGGACTTATGAGGGGAGCAGTCTCCATTGCTCTGGCTTTCAAACAGTTCACATATTCTGGAGTTACATCTGATCCCGTCAATGCGACAATGATCACCAACACCATCATCGTTGTCTTTTTCAGCACACTGGTGTTTGGTTTTCTCACAAAACCACTTCTTCGCTATCTTCTTCCCCATAGCATGACAAGGAAGAACATCAGCCGTGCCGAATCTGGTCCTCCTATTGAGGACTTGAATCTGCCATTGCTATCCTTTGAGGAGTCAGCAGCAACCAACATCAGCCGGGCAAAGGAAAGTCTGTCCTTGTTTATGGAAAGTCCTGTATACACCATACATTATTATTGGAGGAGGTTTGATGATGCCTACATGAGACCTATATTTGGGGGCCCTCTTGCTAGTCAGTCACATTGCTAG 1584 0.4306 MVVMILNWVSDATKNFAHQHALVVPISLFVAVLCLCLLIGHLLEENRWVNESIVAILVGCIAGMILLFITRGKSSHILTFNEELFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMLFGVIGVFVSAFIITSGSWWLFPKLNFLGLTGRDYLAIGTIFSSTDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKLDVSKLNGRTLRVIGDFLYLFCTSTALGFIAGLLTAFILKALSFGRHSSVREIALMVLMAYLSYMLSELLELSGILTVFFCGILMSHYAWHNVTETSRVTTRHVFATMSFIAETFIFLYVGMDALDMEKWRMTKLSYGSLMGINSCLIFLILLGRAAFIFPLSAFANCLNRRADRTSKITMRHQIIIWWAGLMRGAVSIALAFKQFTYSGVTSDPVNATMITNTIIVVFFSTLVFGFLTKPLLRYLLPHSMTRKNISRAESGPPIEDLNLPLLSFEESAATNISRAKESLSLFMESPVYTIHYYWRRFDDAYMRPIFGGPLASQSHC 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1282 527 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Dere05g1282 527 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Dere05g1282 527 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Dere05g1282 527 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Dere05g1282 527 Pfam Sodium/hydrogen exchanger family 30 444 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Dere05g1282 527 Gene3D - 145 197 - -
Dere05g1282 527 NCBIfam sodium/hydrogen exchanger 3 25 447 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Dere05g1282 527 PANTHER SODIUM/HYDROGEN EXCHANGER 21 517 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1282 Dere-ChrDere05 20860667 20865944 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1282 13 527 Antiporters AT5G55470 71.346 0.0 771