Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1278 ATGCTGACGCTCGCGGAAACGAGAGCAAATAAACAAATCCCTCAAGCACAAGCAAGCTCTCGCTCATCCGTCCCATGTGTGTTGAACCCGCTATACATAATGCCCCAGAGAGAAATTTGCAGTTCATTGAAGGAGCCTCGTCCTGTGGCGAGGAAATTCTTGGCCAGGCCTCAGCGTGAAGGTGTTGGCGCTGTTGTTAGAAGAAGCATTGGACGGTTTGAGCTAAAGTACTTTGATCCTTTCCTTGTGTTGGACGAATTCTCAGTTTCTGCTCCTGCTGGCTTCCCTGATCATCCGCACAGAGGGTTTGAGACGGTCACATACATGTTGCAGGGAGCAGTGAGGCATGAGGATTTTGAAGGGCACAAAGGAACAATTGAAGCGGGTGACCTGCAGTGGATGACCGCAGGGAGAGGGATAGTTCACTCTGAAATGCCTGCAGCTCAAGGAACCCAAAAGGGTCTCCAGCTTTGGATCAATCTTGCTTCCAAAGATAAAATGATTGAGCCAAGGTATCAAGAAATGTTGAGCAAGGACATAGCAGAAGCAGTGGAAGATGGCATAAATGTGAGGGTCATAGCAGGAGAAGCTTTAGGAACGAAGTCTCCAATCTACACAAGAACCCCAACCATGTACTTGGACTTCTCTCTCAAGCCAGGATCTCACTTGCAGCAACCTATACCACAGTCATGGAATGCTTTTGCCTATGTGTTGGAAGGAGAGGGTGTGTTTGGCAGCCTCAAATCCCAGCCATCTTCTTCCCACCATATCCTGCTTCTTGGTCCTGGAGATGGCTTAGAGGTATGGAACAGATCCTCTAAGGTTCTTAGGTTTATACTAGTAGGAGGCCAGCCATTGGGTGAGCCTCTGGTTCAGTTTGGACCCTTTGTGATGAACACTCAGGAAGAGATTGACCAGACCATTGATGATTTTGAGAACTGTGTCAATGGGTTTGAGAAAGCCAGACATTGGAAGTCTGAAGCTGCGATTAGTCTTGATTTTTGA 1005 0.4776 MLTLAETRANKQIPQAQASSRSSVPCVLNPLYIMPQREICSSLKEPRPVARKFLARPQREGVGAVVRRSIGRFELKYFDPFLVLDEFSVSAPAGFPDHPHRGFETVTYMLQGAVRHEDFEGHKGTIEAGDLQWMTAGRGIVHSEMPAAQGTQKGLQLWINLASKDKMIEPRYQEMLSKDIAEAVEDGINVRVIAGEALGTKSPIYTRTPTMYLDFSLKPGSHLQQPIPQSWNAFAYVLEGEGVFGSLKSQPSSSHHILLLGPGDGLEVWNRSSKVLRFILVGGQPLGEPLVQFGPFVMNTQEEIDQTIDDFENCVNGFEKARHWKSEAAISLDF 334
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1278 334 FunFam pirin 60 198 - -
Dere05g1278 334 CDD cupin_pirin_N 64 161 - -
Dere05g1278 334 PANTHER PIRIN-RELATED 41 328 IPR012093 -
Dere05g1278 334 Pfam Pirin C-terminal cupin domain 212 316 IPR008778 -
Dere05g1278 334 PIRSF Pirin 45 325 IPR012093 -
Dere05g1278 334 Gene3D Jelly Rolls 60 312 IPR014710 -
Dere05g1278 334 CDD cupin_pirin_C 209 285 - -
Dere05g1278 334 Gene3D Jelly Rolls 181 286 IPR014710 -
Dere05g1278 334 Pfam Pirin 66 159 IPR003829 -
Dere05g1278 334 SUPERFAMILY RmlC-like cupins 48 326 IPR011051 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere05g1278 Dere-ChrDere05 20782783 20787371 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1278 46 322 Calmodulin-binding Proteins AT3G59220 60.932 5.67e-129 368