Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1268 ATGACCGTGATATCCTCATCTTCTTCATCTTCCAGATCTGCACCCTCATCTCCCTCCTCCATTGTCTCCTTCGTCTCTCTCTCCTCCATAATCTCCTCTCTCTCTTCTGTCGTCTCCACCGTCTCTCACTCTCTCTCCTTCGTCATCTCCTCTCTCTCTCTCCTTTGTCGTCTCCTCTCTCTCTCTCTCATCCACCATTTCAGCCCCATCGACGAGATCTGCAGTCTGCTGATATGCTATGCGTCATCTTCGCCGTCGCCGTTGCCACTGCTATCGCCCATTCCGTCGCCGTCACACGGCATCGCCATCCGTGAAGGAAGACCCGCAGATGGTAGAGAATGTGATTCTTTGGGCTACAACGGAATGAGCCACTTTTTCTTTTTTTCTTTCTCGGAAGGCAAACAGCTTGGTGTTGAAAGTTGGTCCAACCGTTTAGCTGTAAAGAAAGGTGTAATGGCAGCATCTGGGGCAGTTCGACCTGTTGTCGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTCGGTTATAACCGCAGCCTCCTCAGCTTCTCTCTCTGCTCGCCGACAGATTATTGCTGGTCCAAGCAAGCAATTTTGGTTTTCTTTCTTCTTTTTCATGATGCCGAGTGACAATGACGGCGAGCCATTTGTGGAGGTCGACCCCACCCGGAGATACGGTCGGTACCCGGAACTACTGGGATCCGGGTCGGTGAAGAAGGTGTACAGAGCGTTCGATCAAGAAGAAGGGATAGAGGTGGCGTGGAACCAGGTGAAGCTCTGGAACCTGGCGGGCGACCCGGACATGGTGGACAGGCTGTATTCGGAGGTCCGACTGCTCCGGAGCCTCACCGACGGGAACATCATCGCTCTGTACAACGTGTGGAGGGACGAGGAGCGGAACACTCTGAACTTCATCACAGAGGTGTGTACCAGTGGGAACCTTAGGGAGTACAGGAAGAAGCACAGACACGTGTCGATGAAGGCGTTGAAGAAGTGGTCTATGCAGATTCTGAAGGGTCTCAACTACTTGCATATGCATGAGCCTTGTATCATCCACAGGGACCTCAATTGCAGTAATGTCTTCGTCAACGGCCATATCGGCCAGGTTAAGATTGGTGATCTGGGTCTGGCAGCGATTGTGGGAAGGAACCACTCTGCGCATTCGATTCTGGGCACGCCGGAGTTCATGGCTCCAGAACTGTACGACGAGGACTACACCGAGATGGTGGACATATACTCGTTTGGGATGTGTGTGCTTGAGATGGTGACTCTGGAGATCCCTTACAGCGAGTGCGACAACGTCGCTAAGATATACAAGAAGGTGTGCTCAGGCATAAGGCCTCGTGCCCTCGAGAAGGTTAAGGATCCAGAGGTCAAGGCTTTCATTGAGAGGTGCCTTGCTCAGCCTAGGGCAAGACCTTCTGCTTCTGAGCTTCTCAAGGATCCTTTCTTTGATGAAGTTAAGGGCGATGATGGCAAAAATGATTGCTCTACTTATTCATAA 1503 0.515 MTVISSSSSSSRSAPSSPSSIVSFVSLSSIISSLSSVVSTVSHSLSFVISSLSLLCRLLSLSLIHHFSPIDEICSLLICYASSSPSPLPLLSPIPSPSHGIAIREGRPADGRECDSLGYNGMSHFFFFSFSEGKQLGVESWSNRLAVKKGVMAASGAVRPVVVFFFFFFFFFSSVITAASSASLSARRQIIAGPSKQFWFSFFFFMMPSDNDGEPFVEVDPTRRYGRYPELLGSGSVKKVYRAFDQEEGIEVAWNQVKLWNLAGDPDMVDRLYSEVRLLRSLTDGNIIALYNVWRDEERNTLNFITEVCTSGNLREYRKKHRHVSMKALKKWSMQILKGLNYLHMHEPCIIHRDLNCSNVFVNGHIGQVKIGDLGLAAIVGRNHSAHSILGTPEFMAPELYDEDYTEMVDIYSFGMCVLEMVTLEIPYSECDNVAKIYKKVCSGIRPRALEKVKDPEVKAFIERCLAQPRARPSASELLKDPFFDEVKGDDGKNDCSTYS 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1268 500 CDD STKc_WNK 224 484 - -
Dere05g1268 500 SUPERFAMILY Protein kinase-like (PK-like) 219 485 IPR011009 -
Dere05g1268 500 FunFam probable serine/threonine-protein kinase WNK9 309 489 - -
Dere05g1268 500 Pfam Protein kinase domain 230 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1268 500 FunFam Probable serine/threonine-protein kinase WNK1 211 307 - -
Dere05g1268 500 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 212 488 - -
Dere05g1268 500 Gene3D Transferase(Phosphotransferase) domain 1 309 490 - -
Dere05g1268 500 ProSiteProfiles Protein kinase domain profile. 226 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1268 500 Gene3D Phosphorylase Kinase; domain 1 210 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1268 Dere-ChrDere05 20590591 20596574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1268 210 487 MAP Kinase Kinase Kinase AT5G55560 80.576 1.88e-172 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Dere05g1268 Pkinase 7.7e-49 CL0016