Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1246 ATGTTCCGTGAGAGGAAGAAAAACCAGAAGATGAAGATGATGGCGAGGAGGGTATCAGAATATGGAGTTTTGGCATTGTTTGCTTTGGTGGGTTTGTTAGCAGTAGCAGAAGCAGAAGGACGAGGTGGTGATAATAATGGGAACGTGAGGAATTTCATTACGTGGGATGATTTGAATGTGGATGAGCCTGGCTTGACCACAAAATCCAACAATGGTGCTCAGGTTCTTGTGGTGGATCAGAATGGTAATGGACATTCCAGAACAGTTCAAGGAGCAGTGGATATGGTGCCTGATCAGAATAGAGACAGGGTGAAGATATACATTTATCCTGGAACTTACAGAGAAAAGGTGTTTGTGCCAAGGACCAAGCCATATATCTCATTCATAGGAAAAAGAAATGAAACACATGGTGTGGTGATTACTTGGAACAGTAAGTCATCAGACATAGGCACAAATGGCCAAGCATTGGGCACATATGGCTCAGCAACTGTAGCAGTAGAATCTGATTATTTCTGTGCAAATAGAATCACTTTTGAGAACTCTGTAGTTGCTCATCCTGGGGGACGAGGCATGCAAGGAGTAGCATTGAGGGTAGATAGTGACAGAGCCATGTTCTACCGAGTCAAAATCTTGGGAACACAGGACACTCTCTTGGATAACACAGGAACCCATTACTTCCTCAAGTGTTTCATCCAAGGAAAAATTGATTTTATTTGTGGCAGTGCAAGATCACTTTATGAGGATTGTCGTCTCAAGTCAATAGCTGAGAACCATGGAGCAATTGCTGCTCATCACAGGGATACGCCTTATGAAGACACAGGCTTTTCTTTTGTAGGTTGCTCAATCCAAGGCACTGGTAAGGTCTACCTTGGAAGAGCTTGGGGAGACTATTCAAGAATAGTATATTCAAATTGTTACATGGATGACATCATAACCCCTGAAGGATGGACTGAATGGAATCACCCTTCTAGAAAGATGACTGCAGTTTTTGGGGAGTATCAGTGCCAAGGAAAAGGAGCAGATAGAAGTGGTAGGGTGCCATGGGCAAAATCTTTCACCTATGAGGAAGCAAGGCCATTTCTGGACAGGAGCTTCATTAATGGAGACCAGTGGCTTAGACTATAG 1125 0.4347 MFRERKKNQKMKMMARRVSEYGVLALFALVGLLAVAEAEGRGGDNNGNVRNFITWDDLNVDEPGLTTKSNNGAQVLVVDQNGNGHSRTVQGAVDMVPDQNRDRVKIYIYPGTYREKVFVPRTKPYISFIGKRNETHGVVITWNSKSSDIGTNGQALGTYGSATVAVESDYFCANRITFENSVVAHPGGRGMQGVALRVDSDRAMFYRVKILGTQDTLLDNTGTHYFLKCFIQGKIDFICGSARSLYEDCRLKSIAENHGAIAAHHRDTPYEDTGFSFVGCSIQGTGKVYLGRAWGDYSRIVYSNCYMDDIITPEGWTEWNHPSRKMTAVFGEYQCQGKGADRSGRVPWAKSFTYEEARPFLDRSFINGDQWLRL 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1246 374 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 67 373 - -
Dere05g1246 374 SUPERFAMILY Pectin lyase-like 74 372 IPR011050 -
Dere05g1246 374 Gene3D - 70 374 IPR012334 -
Dere05g1246 374 FunFam Pectinesterase 71 374 - -
Dere05g1246 374 Pfam Pectinesterase 77 369 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1246 Dere-ChrDere05 20180209 20183803 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1246 45 325 Carbohydrate Esterase AT5G55590 56.478 1.38e-126 365