Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1215 ATGCCGCAAGAGAGCAACTGCAACTCATTTTTCACATCGCCTTCGAAGAGAGGATTAAAGGCGTTGGTCTCCAGCAATGAGGCTTCATACACAGTCACCGAGGAGAGTATCAACGATCATGAACTAGCTCAGAGGAAAGCAGAGGAAGCAGCTTCAAGGAGGTATAAAGCAGCAGAATGGTTGCGTGAGATGGACCATGGAGCATCAGCGTCACTCTCTAAGGAGCCATCCGAAGAAGAGTTCTGCCTTGCACTCCGCAATGGCCTCATTCTCTGCAACGTCCTCAACAAAGTCAATCCCGGGGCTGTTCTCAAGGTGGTGGACAATCCTACTCTTGCGGTTCAGTCTGCAGAAGGAGCGGCTCAGTCTGCCATTCAGTACTTTGAGAATATGAGAAATTTCCTGGAGGCCGTCAAGGATATGAAGCTATTGACGTTTGAAGCATCGGATTTAGAAAAGGGGGGTTCATCGAGTAAAGTTGTGGATTGCATTCTATGTTTGAAAGGATATTATGAATGGAAGCTATCCGGTGGGGTTGGGGTGTGGAGGTATGGAGGAACTGTGAGGATTACTTCCTTTCCAAAGGGATCTCCTTCCTCCATAACTGGCAGTGAAAGTACTGATGAATCCCTGGATGAGTCCGAGTCATCGCAATATGAACAGCTACTAGAATTTCTCCATCTATCGAGTGAGGTCTCAATTGAAGAATCCAGAACTGTCAATGCTTTGGCTTTCCTATATGATCACTTTGGACTCAGACTCCTTCAAGCTTACCTTAGAGAGACTGATGGGATTGAAGATCTGCCTTTGAATTCAATGGTAATTGATACTTTGCTCAACAAGGTAGTCAAGGATTTCTCAGCATTGCTTGTTTCTCAAGGAACTCAGCTAAGTCTTTTCTTGAAGAAAATATTGAAAGGCGATATTGGTTGCCTATCAAAGACAGAGTTCATAGAAGCTATCTCACTATATCTTAATCAAAGAAGTAGTTTGGCATCCAAAGATTTCTCAAAATTCTGCATATGTGGTGGAAAACTTGACGGCAGTCGGAATGAGAATACTTATTCTTTCAACCATGCTGAAATAATTAATACTCAACAGAAACAACTTGAGGGGATGAAATACTATTTTGAAGAAACAAAAATGGAGGTCAAACAAATTCAATCAGAGTGGGAGCAAGAATTGTGTAGGCTTGGTGAGGATATAGGACTTGAGCATCATATCAAGAGCCTTGAAGTGGCATCCTCTTCCTACCACAAAGTTTTAGAGGAAAACCGCCAACTTTACAATCAAGTACAAGACCTGAAAGGAGCTATCAGGGTCTACTGTAGAGTGAGGCCCTTCCTACCAGGACAATCAACTGGAAAGTCAACAGTAGATTATATAGGAGAAAATGGAAATATCATGATTGTCAATCCCCAAAAGCAGGGGAAAGATGCAAGAAGGGTGTTTTCATTCAATAAGGTGTTTGCAACAAACGTCACACAAGAACAAATATATGCTGACACGCAACCATTGATCAGGTCTGTTTTAGATGGCTATAATGTATGCATCTTTGCATATGGACAGACTGGCTCAGGGAAAACCTACACGATGAGTGGCCCAGATCTGATGACTGAAGAGACATGGGGTGTAAACTATAGGGCTTTGCGTGACTTATTCCATATATCAAAGGAGAGGGCGAACGTCATAAAATATGAGGTTGGAGTCCAGATGATTGAAATATACAATGAACAAGATTTATTTGTTAATTGCTTCAGTTCCTTAATAAAATTTACATTAGATATACGAAACAATTCTCAGCTAAATGGCCTTAATGTGCCTGATGCATGTTTAGTTCCGGTTCATTGTACTCAAGATGTTCTTGATTTAATGAGGATTGGTCTGAAGAACCGTGCAGTGGGTGCTACAGCTCTAAATGAGCGAAGTAGCCGTTCTCATAGTATTTTGACAGTTCATGTTCGAGGAAGAGAGCTAGTTTCTAACTCCATTCTTAGAGGTTGTCTCCATCTTGTGGATTTGGCTGGGAGCGAAAGGGTGGACAAATCTGAGGCTGTTGGAGAAAGACTGAAGGAGGCCCAACATATAAATAGATCTCTCTCTGCTCTTGGAGATGTTATATATGCTTTGGCACAGAAGAGTCCACATATTCCTTATAGAAACAGCAAGCTCACACAAGTATTACAAGATTCTTTAGGTGGGCATGCCAAAACTTTGATGTTTGTTCATATAAACCCCGAACAAAACGCTTTTGGTGAGACAATTAGCACACTCAAGTTTGCCGAGAGGGTGGCAGCCATTGAACTTGGTGCTGCGCAGTCCAATAAGGAAACTGGTGAAATCAGAGAGCTTAAAGAAGAGATATCAAACCTGAAGCTGGCATTGGAGAGGAAGGAAACTGAATTGGAGCAATGGAGAGCTGGGAATGCTCGAAACAATGTAGAATCTCAGAAACAAAGGGCAGTTTCGCCTTTTCGCCTACCCAAATATGGTGTCAATGCCAGCATGAAGCCAGAAACTTGCCAACGACCCATCGATGATAAAACTTCTGAGGCTAGAAGTTGTTCTTCTGGCAAGCAAAGGAGGTCAAGATTTCCCTCATCATTCATGGACAAAGAATCCATTCCAAAAATGTCTCTTCTGGCTGAAGAAAAGATAGCAAACTCAGGGAAGGCAAGATCACCATCTCCGCCTGTCAGAAGATCAATGTCCACTGATAGAGGTTCCGTCATTAAAAGCAAGGTCAAACTTGACACAGCAGATAACCAACCAATTTTGAAACATCCATTTCCAGCTAGAGTACCAGTAAATAAATCTCTTGCCCCCATGCCTATGGCCCCATGCATTGACAATAACTCAAGGATGTATGTGAATTCACATGAGCCAGTGAAGCAGGACAACATTTCCGAAACTCTCTTCAACCTCCAGAAAGTCAACTCCGGGAAAGTTTATCAAGAAAAAGAAGAGGAGCAATTTAAGCAAGCACTTGGTGTAGTAAGACAAGGTGGTATCAGAAAGAGCAAGGCTGAGGGGAAGGCCAAGGCCAAGCATCATCATCAGCAACTCCCTTTTAGGATTCAAAAGTCTGATTTGATACCTACATTGATTCCTGACTTGGACGTTACTGGGGAAACGGCATTGGAGGCGCCTCGAAAGAGTGATTTCTCTGAACCAGAAAATGATCTTGGCCTAATCGAATCTCCGGCCCGCAGTGCTTTAAGCCTTAAAAAGATACGTCAGAATTTCCCAAGGAATTCTCAAAACCTTGAACCAAGAGGAACTCTGCAAACAGGGGAACCCTTATTGGCTAGCAAAGTTGAAAACAAACTTCTAAATAGCTTAAGCCGAAATCTCAAGGAAGGAAGCAATACATCCATGCCTGAATTTAGAAGAAGCAGATCAACCCCACGTGGAAAATTCCTTTTATCTTGA 3432 0.4257 MPQESNCNSFFTSPSKRGLKALVSSNEASYTVTEESINDHELAQRKAEEAASRRYKAAEWLREMDHGASASLSKEPSEEEFCLALRNGLILCNVLNKVNPGAVLKVVDNPTLAVQSAEGAAQSAIQYFENMRNFLEAVKDMKLLTFEASDLEKGGSSSKVVDCILCLKGYYEWKLSGGVGVWRYGGTVRITSFPKGSPSSITGSESTDESLDESESSQYEQLLEFLHLSSEVSIEESRTVNALAFLYDHFGLRLLQAYLRETDGIEDLPLNSMVIDTLLNKVVKDFSALLVSQGTQLSLFLKKILKGDIGCLSKTEFIEAISLYLNQRSSLASKDFSKFCICGGKLDGSRNENTYSFNHAEIINTQQKQLEGMKYYFEETKMEVKQIQSEWEQELCRLGEDIGLEHHIKSLEVASSSYHKVLEENRQLYNQVQDLKGAIRVYCRVRPFLPGQSTGKSTVDYIGENGNIMIVNPQKQGKDARRVFSFNKVFATNVTQEQIYADTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPDLMTEETWGVNYRALRDLFHISKERANVIKYEVGVQMIEIYNEQDLFVNCFSSLIKFTLDIRNNSQLNGLNVPDACLVPVHCTQDVLDLMRIGLKNRAVGATALNERSSRSHSILTVHVRGRELVSNSILRGCLHLVDLAGSERVDKSEAVGERLKEAQHINRSLSALGDVIYALAQKSPHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEQNAFGETISTLKFAERVAAIELGAAQSNKETGEIRELKEEISNLKLALERKETELEQWRAGNARNNVESQKQRAVSPFRLPKYGVNASMKPETCQRPIDDKTSEARSCSSGKQRRSRFPSSFMDKESIPKMSLLAEEKIANSGKARSPSPPVRRSMSTDRGSVIKSKVKLDTADNQPILKHPFPARVPVNKSLAPMPMAPCIDNNSRMYVNSHEPVKQDNISETLFNLQKVNSGKVYQEKEEEQFKQALGVVRQGGIRKSKAEGKAKAKHHHQQLPFRIQKSDLIPTLIPDLDVTGETALEAPRKSDFSEPENDLGLIESPARSALSLKKIRQNFPRNSQNLEPRGTLQTGEPLLASKVENKLLNSLSRNLKEGSNTSMPEFRRSRSTPRGKFLLS 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1215 1143 SMART ch_5 53 170 IPR001715 GO:0005515
Dere05g1215 1143 MobiDBLite consensus disorder prediction 887 909 - -
Dere05g1215 1143 CDD CH_AtKIN14-like 53 168 - -
Dere05g1215 1143 MobiDBLite consensus disorder prediction 1115 1131 - -
Dere05g1215 1143 SUPERFAMILY Calponin-homology domain, CH-domain 45 195 IPR036872 -
Dere05g1215 1143 PRINTS Kinesin heavy chain signature 668 686 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere05g1215 1143 PRINTS Kinesin heavy chain signature 513 534 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere05g1215 1143 PRINTS Kinesin heavy chain signature 717 738 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere05g1215 1143 PRINTS Kinesin heavy chain signature 637 654 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere05g1215 1143 MobiDBLite consensus disorder prediction 1115 1143 - -
Dere05g1215 1143 SMART kinesin_4 436 775 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere05g1215 1143 ProSiteProfiles Calponin homology (CH) domain profile. 51 172 IPR001715 GO:0005515
Dere05g1215 1143 FunFam kinesin-like protein KIN-14F 43 172 - -
Dere05g1215 1143 ProSiteProfiles Kinesin motor domain profile. 438 767 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere05g1215 1143 MobiDBLite consensus disorder prediction 837 874 - -
Dere05g1215 1143 Pfam Calponin homology (CH) domain 53 172 IPR001715 GO:0005515
Dere05g1215 1143 Coils Coil 774 808 - -
Dere05g1215 1143 Gene3D Kinesin motor domain 433 808 IPR036961 -
Dere05g1215 1143 Pfam Kinesin motor domain 444 767 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere05g1215 1143 PANTHER KINESIN-LIKE PROTEIN KLP-3 58 962 IPR027640 GO:0003777|GO:0007018
Dere05g1215 1143 MobiDBLite consensus disorder prediction 841 858 - -
Dere05g1215 1143 FunFam kinesin-like protein KIN-14F 433 808 - -
Dere05g1215 1143 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 439 805 IPR027417 -
Dere05g1215 1143 Gene3D - 43 172 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1215 Dere-ChrDere05 19511151 19520694 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1215 426 767 Calmodulin-binding Proteins AT5G65930 42.120 7.61e-73 263