Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1184 ATGAGTCTTTCAAAGAGTTGGAAGTATGAAGTTCTTTTTGGCTTGTCGTTCTGCTGCTATTTGGTACTGGTTACTGCGCAGGATTTAGTCACTGATCCCTCTGAAGTTGACGCATTGAAAACCATCAAGGAGAGTTTGGTTGATCCTAACAGAAACCTGAGCAACTGGAATCGGAGAGACCCATGTTCATCTAACTGGACAGGAGTTAAATGCTACAATGAAACATTAGCTGATGGCTATCTGCATGTTGAAGAATTGCAACTACTGAATATGAATTTATCTGGAACTTTGGCACCAGAGATTGGTCGCTTGGCATATCTCAAAATATTGAGCTTTATGTGGAACAACATAAGTGGGAGTATACCGAAGGAAATTGGCGATATCAAAACTTTGAAACTCTTGCTCTTGAATGGAAACCACTTGACAGGTTCTCTGCCGGATGAGCTTGGTTATCTTCCAAACTTGGACAGAATACAAATTGATCAGAACCAAATATCAGGATCTTTACCTGTATCATTTGCAAACCTGAACAAGACAAAGCACTTTCACATGAACAACAATTCAATTAGCGGACAAATCCCACCAGAGCTTTCCCGCTTGCCAAGTCTTGTTCATATCCTTCTTGACAACAACAACCTATCTGGATATCTTCCCCCTGAGCTCTCCGAGTTGCCAAACTTACTTATAATTCAACTTGATAATAATAACTTTGGTGGGAGTACCATTCCAGAGTCTTATGCCAACATGTCAAAATTGTTGAAAATGAGCCTTAGGAATTGCAACTTGCAAGGATCAATTCCTGATTTAAGCAGGATAAAAGACCTTGGTTATCTTGACCTCAGTTCCAATCAGTTGAATGGATCAATACCCTCCAATAAGCTTTCTGACAATGTCACAACCATTGATTTATCGAAGAACAAGCTTACTGGAACTATTCCATCCTATTTTTCTCAACTTCCACTTCTTCAAAAATTGTCAATTGCAAACAATTCTTTAAATGGCAGTGTTCCTTCTGCCATTTGGCAGAACAAGACTTTAAATGGAACAGAAAGATTTCTCTTGGAATTTCAACATAATAATTTTACAAGCATATCAGGCAGTACTAGCCTTCCTCCAAATGTCTCACTCTGGCTTGAGGGAAATCCTCTATGTTCAAATGGCAGCCTAGGTCAGTTCTGTGGATCTGAAATTGCCAATGACAGTGATAGTATGGTTCCAACAAACTCCAATGTTAGCTGTCTCAGTCAAGCATGTCCCCCTCCTTATGAATATTCTACATTATCTCCGGTGGAGTGTTTCTGTGCAGCCCCTTTGCTTGTTGAGTATCGGTTGAAAAGTCCGGGATTTATAGACTTCCGTCCCTATGTTAATTCATTTGAGACATATCTCGCAAATGGACTGGACTTATTCTTATATCAACTATACATCGATGCATTTATGTGGCAAGAAGGGCCACGACTGAGAATGTTCTTGAAGCTTTTTCCTGTCTATGATGTTCAGAACAAAAGCTCCCATACTTTCAATACAAGTGAGGTTGTAAGGATAAGAAGCATGTTCACAGGATGGTTAATTTCTGACAGTGATATATTTGGGCCTTATGAACTGCTTGGCTTCACTCTCCTGGATCCTTACAAGGATGTGATAGAAATCCCTAGAAGTTCTTCAGGGATAAGCAAGGGTGCACTGGTTGGCATAGTATTGGGGGCAATTGCCTGTGCAGTTACATTATCTGCAATTGTTAGTCTTATTATATTCAGATTGGCCATGAGAGGCCACCGTACAATTTCAAAACGACATCCAACATCAAAGATTTCGATAAAAATTGATGGTGTGAGGGCCTTTACATATGGAGAAATGGCACAGGCTACAGGCAATTTTAGTGACTCTGCACAAGTTGGCCAAGGGGGTTATGGGAAGGTTTATAAGGGTATTCTTGCTGATGGCACTGTTGTTGCCATAAAGCGTGCACAGGAAGGATCTCTGCAAGGTGAGAGGGAGTTCCTAACAGAAATACAACTATTATCCAGGTTGCATCATCGCAACCTTGTGTCTTTGATTGGATACTGTGATGAAGAAGGTGAACAGATGCTGGTTTATGAATTCATGCCAAATGGCACACTACGGGATCACCTATCTGTTACTTCCAAAGAAGCTCTGAGTTTTGCCATGAGAATGAGGATTGCACTAGGGTCAGCTAAAGGTATTCTGTATCTACATACAGAAGCTGATCCACCAATATTCCACCGTGATGTCAAGGCCAGCAACATATTATTGGATTCTAAGTTCACAGCAAAAGTTGCTGATTTTGGACTTTCACGACTTGCCCCTGTTCCAGATATTGAAGGAATTGTGCCTGCTCATGTATCTACAGTGGTAAAGGGGACCCCGGGTTACCTTGATCCGGAGTACTTCTTAACTCATAAGTTGACTGACAAGAGTGATGTTTATAGTCTTGGTGTCGTATTTCTCGAATTATTGACAGGGAGGCAACCAATCTCGCATGGGAAAAATATTGTTAGAGAGGTTAATGTTGCATACCAATCTGGTGTGACTTTCTCTGTTATTGATGGACGCATGGGGTCTTATTCTTCTGAGTGCATTGAGAAATTTTTGGCCCTAGCCCTTAAGTGTTGCCAAGATGAGCCAGATGCACGGCCTAAAATGGCAGAAGTGGTTCGAGAGCTTGAAAACATATGGTCTATGATGCCTGAGTCTGATACCAAGAGAACTGAATCTATAACCCCCAGTGATTCTGGAAAAATAGTCAGCTCATCTTCATCTTCTAATATGAAGACTCCTTTCATATCAGCAGATGTGTCGGGTAGTGACCTTGTTAGTGGGGTAATACCAACCATTGTGCCAAGATAG 2868 0.4111 MSLSKSWKYEVLFGLSFCCYLVLVTAQDLVTDPSEVDALKTIKESLVDPNRNLSNWNRRDPCSSNWTGVKCYNETLADGYLHVEELQLLNMNLSGTLAPEIGRLAYLKILSFMWNNISGSIPKEIGDIKTLKLLLLNGNHLTGSLPDELGYLPNLDRIQIDQNQISGSLPVSFANLNKTKHFHMNNNSISGQIPPELSRLPSLVHILLDNNNLSGYLPPELSELPNLLIIQLDNNNFGGSTIPESYANMSKLLKMSLRNCNLQGSIPDLSRIKDLGYLDLSSNQLNGSIPSNKLSDNVTTIDLSKNKLTGTIPSYFSQLPLLQKLSIANNSLNGSVPSAIWQNKTLNGTERFLLEFQHNNFTSISGSTSLPPNVSLWLEGNPLCSNGSLGQFCGSEIANDSDSMVPTNSNVSCLSQACPPPYEYSTLSPVECFCAAPLLVEYRLKSPGFIDFRPYVNSFETYLANGLDLFLYQLYIDAFMWQEGPRLRMFLKLFPVYDVQNKSSHTFNTSEVVRIRSMFTGWLISDSDIFGPYELLGFTLLDPYKDVIEIPRSSSGISKGALVGIVLGAIACAVTLSAIVSLIIFRLAMRGHRTISKRHPTSKISIKIDGVRAFTYGEMAQATGNFSDSAQVGQGGYGKVYKGILADGTVVAIKRAQEGSLQGEREFLTEIQLLSRLHHRNLVSLIGYCDEEGEQMLVYEFMPNGTLRDHLSVTSKEALSFAMRMRIALGSAKGILYLHTEADPPIFHRDVKASNILLDSKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGRQPISHGKNIVREVNVAYQSGVTFSVIDGRMGSYSSECIEKFLALALKCCQDEPDARPKMAEVVRELENIWSMMPESDTKRTESITPSDSGKIVSSSSSSNMKTPFISADVSGSDLVSGVIPTIVPR 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1184 955 ProSitePatterns Protein kinases ATP-binding region signature. 632 654 IPR017441 GO:0005524
Dere05g1184 955 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 33 191 - -
Dere05g1184 955 ProSiteProfiles Protein kinase domain profile. 626 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1184 955 Pfam Protein kinase domain 627 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1184 955 MobiDBLite consensus disorder prediction 905 929 - -
Dere05g1184 955 CDD STKc_IRAK 632 898 - -
Dere05g1184 955 Gene3D Ribonuclease Inhibitor 188 295 IPR032675 -
Dere05g1184 955 Gene3D Transferase(Phosphotransferase) domain 1 702 918 - -
Dere05g1184 955 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Dere05g1184 955 Gene3D Ribonuclease Inhibitor 33 187 IPR032675 -
Dere05g1184 955 SUPERFAMILY Protein kinase-like (PK-like) 611 918 IPR011009 -
Dere05g1184 955 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 192 294 - -
Dere05g1184 955 ProSitePatterns Serine/Threonine protein kinases active-site signature. 746 758 IPR008271 GO:0004672|GO:0006468
Dere05g1184 955 Gene3D Phosphorylase Kinase; domain 1 597 701 - -
Dere05g1184 955 SMART serkin_6 626 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1184 955 SUPERFAMILY L domain-like 44 389 - -
Dere05g1184 955 PANTHER RECEPTOR-LIKE PROTEIN 55 42 899 - -
Dere05g1184 955 FunFam Leucine-rich repeat protein kinase family protein 590 701 - -
Dere05g1184 955 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 702 912 - -
Dere05g1184 955 Gene3D Ribonuclease Inhibitor 296 385 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1184 Dere-ChrDere05 19017000 19031498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1184 18 908 Receptor kinase-like Gene Family AT5G01950 59.756 0.0 1037
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Dere05g1184 Pkinase 1.5e-46 CL0016