Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1150 ATGCCCTCCCAAGCACTAGAATTGTTGGAAGGAAGAAATAGGTCCCTCTGTCGCCAAATTCGCCTTCTTCCTGTCTCGCTCGGCGCGCTTCTGTGGTCCAACTTCGAAGGTGAAGCTACTATGGCAGCCGTGGTTGCTCCACCCCTAAGTCACGACCTCTCAGAGCCAGTCGTTGAAGTCAAGCTCTTTAATCGCTGGACCTTTGATGATGTTCAGGTAAATGACATATCCTTGGCCGATTACATTGGTGTGGCTCCTGCCAAGCATGCAACCTATGTGCCCCACACTGCTGGGAGGTATTCAGTCAAGCGTTTCAGGAAAGCGCAGTGTCCAATAGTTGAGAGGCTTACCAATTCTCTGATGATGCATGGACGAAATAATGGGAAAAAGCTTATGGCAGTGAGGATTGTAAAGCATGCAATGGAAATTATCCACCTGCTCACGGATCAAAATCCTATCCAAGTTATTGTTGATGCTGTGATCAACAGTGGACCAAGGGAAGATGCTACACGTATTGGATCTGCTGGTGTTGTCAGACGTCAGGCGGTGGATATCTCTCCCTTGCGACGTGTGAATCAGGCTATTTATCTCCTTACTACCGGTGCTCGTGAGGCTGCATTCAGGAACATTAAGACGATCGCAGAATGCTTGGCTGATGAATTTATCAACGCTGCAAAGGGGTCATCTAACAGCTATGCCATTAAGAAGAAGGACGAGATTGAGAGAGTTGCCAAGGCCAACCGTTGA 747 0.4833 MPSQALELLEGRNRSLCRQIRLLPVSLGALLWSNFEGEATMAAVVAPPLSHDLSEPVVEVKLFNRWTFDDVQVNDISLADYIGVAPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEFINAAKGSSNSYAIKKKDEIERVAKANR 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1150 248 PANTHER RIBOSOMAL PROTEIN S7 50 248 IPR000235 GO:0006412
Dere05g1150 248 FunFam 40S ribosomal protein S5 44 248 - -
Dere05g1150 248 Pfam Ribosomal protein S7p/S5e 102 248 IPR023798 -
Dere05g1150 248 Gene3D Ribosomal protein S7 domain 41 248 IPR036823 -
Dere05g1150 248 ProSitePatterns Ribosomal protein S7 signature. 114 140 IPR020606 GO:0003723|GO:0003735|GO:0006412
Dere05g1150 248 SUPERFAMILY Ribosomal protein S7 61 248 IPR036823 -
Dere05g1150 248 NCBIfam 30S ribosomal protein S7 59 248 IPR005716 GO:0003735|GO:0006412|GO:0015935
Dere05g1150 248 CDD uS7_Eukaryote 61 248 IPR005716 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1150 Dere-ChrDere05 18500173 18502789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1150 59 248 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 92.632 3.40e-133 372