Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1139 ATGCACATATATTCCCAACCTACTGATCAGAAAAAGATGCTTCAACTTAAGCTCCTGCCGTTCATCATCATACTCTGGTCGTGGCAGACCCTAAACGGCGTCGTTTCAGACCCGCAGATCCGTCTTCTGAACAGTGGGTGCAGCCAATACAACGCCTCCAACTTGTCCAGCTTCAACGACAACCTAAACGCAACGTTTCGGGACCTCAGAGAGCAGGTCAGCAATCAAAGCAAGCACTTCGCCACGGCGCAGCGAGCCGTCGGAGCCAACCCCGTTTACGCTCTTTTCCAATGCAGAAACTATCTCTCCGTCGCCGACTGCCTCGCTTGCTTCACCACCGCCACGGGGAAAATCCACAACTGCTCCGCCGGGTCCAATGGCGCCCGCGTCGTCTACGACGGCTGCTTCCTCAGGTATGAGAGCAGTGGCTTCTATGACCAGAGCACGCAGCCCGGCAACAGCATGGCGTGCGGGAACCAGAGCTCCGCAGAAGCCGCCGCATTTACTGCTGCGGCACAACAGGTGCTGACGGATCTCCAGATAGCGACGCCCAGAATAGCCGGCTTCTCTGCGGCCACCAAGACGCAAGTCCCGAGCCCTAATTCTCCGACCACCATCTATGCGTTCGCTCAATGCGTTGAAACTCTCTCGCCCGATGCCTGCCTCGATTGCTTGAGGGTTGGGGACGGCAATTTGCAGAGTTGTCTTCCCAATTCGGACGGTAGGGCTTACGATGCTGGGTGTTTTATGAGATACTCCACCACTTCCTTCTTCGCTGATAACTACACCATTGACATCACTCCCTTCATGAAACAAGGAGGTTCAAGCAAGAAGGCGGCCATTATTGGAGGAGTTGTTGGAGGTGTAGCTCTTGTTTTGATCCTTCTTGCATTATTGTTTGCCTGGGTCAGAAGATCAAAGAGGCCCAAGAGGGCTCCTAGAGGTGACATATTGGGAGCAACCGAGCTGAAAGGCCCAGTTAATTACAGGTATAAGGATTTGAAGTCTGCAACCAAAAATTTCAGTGAAGAAAACAAACTAGGAGAAGGAGGATTTGGTGAAGTATATAAGGGCACTCTGAAGAATGGGAAATTAGTTGCAGTCAAGAAATTAGCTTTAGGTCACTCCAAAAGAATGGTTGAAGATTTTGAGAGTGAAGTCAAGCTCATAAGTAATGTTCATCATCGGAATCTTGTTCGGCTTCTGGGATGTTGCAGTAAGGGCCAAGAGAGAATCCTTGTTTATGAATACATGAAAAACAGCAGCCTTGACAGATTTTTATTTGGGGAAAAGAAAGGTTCCCTCAACTGGAAGCAACGGTTTGATATAATTTTAGGAACAGCAAGGGGTTTGGCCTATCTACATGAGGAATTTCATGTCTGTATTATACATAGAGATATAAAGACAAGCAACATTCTCTTGGACGATGATCTTCAGCCCAGAATTGCTGATTTTGGATTGGCAAGGCTTTTACCTGAAGACCAATCTCATCTTAGCACAAAATTTGCAGGAACATTGGGATACACAGCACCTGAGTACGCAATTCATGGTCAGTTGTCAGAGAAGGCTGATACCTACAGCTATGGTGTTGTAGTCCTAGAAATCATAAGTGGCCGAAAAAGCAGTGAATTGAAGGTTGATGCTGAAGCCGAAGGAGAATTCCTCCTTCAACGAGCTTGGAAACTGTACGAGAAAGGCATGCACTTGGAGTTGGTGGACAGTACCTTAGACCCTAGTGACTATGATGCAGAAGAAGTGAAGAAAATCATAGAGATTGGTCTGCTGTGCACCCAAGCTTCTGCTGCAGTAAGACCAACAATGTCTGAAGTAGTTGTTCTGCTCAAAAGCAAGGGCTTATTGGAGCACATGAGACCCACCATGCCTGTCTTCATTGAAACTAATATGAAGTCCAGGCCAGACACCTCCACCTCCACTGGTTCCTCTACATCCAATGCAACTGCCTCCATTTCTATACTATCAGCAAGATGA 1989 0.4801 MHIYSQPTDQKKMLQLKLLPFIIILWSWQTLNGVVSDPQIRLLNSGCSQYNASNLSSFNDNLNATFRDLREQVSNQSKHFATAQRAVGANPVYALFQCRNYLSVADCLACFTTATGKIHNCSAGSNGARVVYDGCFLRYESSGFYDQSTQPGNSMACGNQSSAEAAAFTAAAQQVLTDLQIATPRIAGFSAATKTQVPSPNSPTTIYAFAQCVETLSPDACLDCLRVGDGNLQSCLPNSDGRAYDAGCFMRYSTTSFFADNYTIDITPFMKQGGSSKKAAIIGGVVGGVALVLILLALLFAWVRRSKRPKRAPRGDILGATELKGPVNYRYKDLKSATKNFSEENKLGEGGFGEVYKGTLKNGKLVAVKKLALGHSKRMVEDFESEVKLISNVHHRNLVRLLGCCSKGQERILVYEYMKNSSLDRFLFGEKKGSLNWKQRFDIILGTARGLAYLHEEFHVCIIHRDIKTSNILLDDDLQPRIADFGLARLLPEDQSHLSTKFAGTLGYTAPEYAIHGQLSEKADTYSYGVVVLEIISGRKSSELKVDAEAEGEFLLQRAWKLYEKGMHLELVDSTLDPSDYDAEEVKKIIEIGLLCTQASAAVRPTMSEVVVLLKSKGLLEHMRPTMPVFIETNMKSRPDTSTSTGSSTSNATASISILSAR 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1139 662 FunFam Cysteine-rich receptor-like protein kinase 2 418 622 - -
Dere05g1139 662 ProSiteProfiles Gnk2-homologous domain profile. 150 257 IPR002902 -
Dere05g1139 662 SMART serkin_6 341 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1139 662 Gene3D Transferase(Phosphotransferase) domain 1 418 624 - -
Dere05g1139 662 ProSitePatterns Protein kinases ATP-binding region signature. 347 370 IPR017441 GO:0005524
Dere05g1139 662 MobiDBLite consensus disorder prediction 634 662 - -
Dere05g1139 662 Gene3D - 39 144 IPR038408 -
Dere05g1139 662 Gene3D - 153 257 IPR038408 -
Dere05g1139 662 MobiDBLite consensus disorder prediction 635 662 - -
Dere05g1139 662 Pfam Protein tyrosine and serine/threonine kinase 344 612 IPR001245 GO:0004672|GO:0006468
Dere05g1139 662 ProSiteProfiles Gnk2-homologous domain profile. 40 144 IPR002902 -
Dere05g1139 662 Gene3D Phosphorylase Kinase; domain 1 310 417 - -
Dere05g1139 662 CDD STKc_IRAK 347 615 - -
Dere05g1139 662 ProSiteProfiles Protein kinase domain profile. 341 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1139 662 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 93 649 - -
Dere05g1139 662 Pfam Salt stress response/antifungal 47 141 IPR002902 -
Dere05g1139 662 Pfam Salt stress response/antifungal 157 254 IPR002902 -
Dere05g1139 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Dere05g1139 662 FunFam Cysteine-rich receptor-like protein kinase 2 305 417 - -
Dere05g1139 662 SUPERFAMILY Protein kinase-like (PK-like) 324 614 IPR011009 -
Dere05g1139 662 FunFam Cysteine-rich receptor-like protein kinase 2 152 257 - -
Dere05g1139 662 FunFam Cysteine-rich receptor-like protein kinase 2 39 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1139 Dere-ChrDere05 18391504 18400164 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1139 16 662 Receptor kinase-like Gene Family AT1G70520 37.065 7.32e-135 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere05g1139 PK_Tyr_Ser-Thr 1.3e-49 CL0016