Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1119 ATGGCACCAGTTTCATTCCCTCCTGGCTTCAGGTTCCACCCTACAGATGAAGAGCTCGTTGCTTATTATCTCAAAAGAAAGATCAATGGACGAAAGATTGAGTTAGAGATCATCCCTGAAGTTGATCTCTACAAGTGTGAGCCTTGGGATTTGCCAGGAAAATCATTGTTACCAGGGAAAGATATGGAGTGGTATTTCTTCAGTCCTCGAGATAGGAAATACCCAAACGGATCAAGAACAAATCGAGCAACAAAATCTGGATATTGGAAGGCCACAGGGAAAGATAGGAAGGTGAATTCTCAGTCTCGTGCAGTGGGTATGAAGAAAACCCTAGTTTATTATCGAGGAAGAGCCCCACATGGCTCTCGCACTGATTGGGTTATGCATGAGTATCGTCTTGACGAGAGAGAATGCGAAACTGCTTCTTCTGGCATGCAGGAGGCCTACGCATTATGCCGAGTGTTCAAGAAGAGCACATTGATCACCCCAAAAATTGGAGACCACTACGTGAGCAGCAGCCATGGAAATTATCATCAGATGGGCAGTGACCAGACATCATCGAGCATCGAACTATACTCTGAAGGAAGAGGCGAAGATTTTGAGAGCTCTAACAATTACTTGATGCCTCTGGACACTACGACTTGCTCACCCTACAACATAGCCAATAATGGGACAACCTTAAACAGTATCAATACGTGTGGAACAAGTGAGCATGGGAATAGTTGGTCCCAGTTCTTATCTGATGACCCATTATTCAGCCTTCCAGCTTCTTCATTTCCCAACTATGGAGCCATCTCATACCCTCCATCCAAGGTGGATATAGCTTTAGAGTGTGCAAGGATGCAGCATAGGTTTACCATGCCACCACTGGAGGTTGAGGACTTTCCTCAAGTTGGGATTTCTGAGATGAAGATGCCACAACCTAATAATTCTGGTGCCATTTGTGGAAGCAGAAATGAAAAAACAACGGATATTTTGCAGGAAATTCTATCAGTTGCTCAAGCTTCACAGGAATTGATTAACCAGACCTCAAGCTATTCACAGACATGGCGTGGCAACAATACTGAATACTATGCTCCTCGTGAAGATGACGACTTTACTTTCATGGTTGGAAGAGGAAATGGTGAGAATTATAGCTACGACCATGTCAGTGACTTGAGTTCCATGAGATGCATCAATGAGAAAACATGGGAAGATTCAAACACAATCAAGTCCATAGAGATTGGAGATCTGGATGATGAGTTCAAGGCAGAGAGGAAGGTGGAGAATTTGAGATGGGTAGGAATGTCAAGCAAAAATTTGGAACAGAGCTTTATGGAAGATCAAAAGATTGTTCCTATTGAGGATATTACAAATTTCCAAACAAACAGGGAAGAGAATGAGGTGCAAGCAGGATCTGAGCATCACCATAGCAACAACATCAATGACTTCTCGTTGGGATTCATCAATGATGATGAACCAAATGAGAACTTCATAGATGAAGTTACCACCATGGATGACTATTCAAGCTCTCCAAGCTGCTTTGAGGTGGTTGAGGAAGTAAAAGTCAGCCATGGAATGTTTGTGGCAACTCGCCAAGCAGCCGAGACATTCTTTCACCAGATAGTTCCTTCACAAACCCTCAAGGTTCACCTCAACCCAGTAATGGCAATTAACGATAATCTATCTACAGAAGATGCAGAGACAGAAGAGACACAAATAATGAGAATGGAGAACCAAGTGTCCTTCACGAAGTTGAAGGCCAATGTGATGGGGAAGCTAATAATAAAGCCTTCAAAGACAATAACTAGTGCCATTGTGTTCATGTTTGCACTAGTTTTGATGTATTGTGCTCATTATTTGGAGGAGCAAGTGCAAATATGGAAACCAGACCCAGAAGATGAAGATGGGAAAGAGAAATGTTGCTCTTGTGCTAACAGCATGAAGAAAATCCTACGCAATGATAAAGAAAGGGTTTGGTTTGTTGGTATCAAAAGTGGAAGAGGATTTAGTGTGGTGTTGAAGAAGGTGGGGATTTTCCTTACAATTTCATTAGCACTGTGTACCATGTGGGCTAACCACGTCACAGTTACTTAA 2076 0.4263 MAPVSFPPGFRFHPTDEELVAYYLKRKINGRKIELEIIPEVDLYKCEPWDLPGKSLLPGKDMEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQSRAVGMKKTLVYYRGRAPHGSRTDWVMHEYRLDERECETASSGMQEAYALCRVFKKSTLITPKIGDHYVSSSHGNYHQMGSDQTSSSIELYSEGRGEDFESSNNYLMPLDTTTCSPYNIANNGTTLNSINTCGTSEHGNSWSQFLSDDPLFSLPASSFPNYGAISYPPSKVDIALECARMQHRFTMPPLEVEDFPQVGISEMKMPQPNNSGAICGSRNEKTTDILQEILSVAQASQELINQTSSYSQTWRGNNTEYYAPREDDDFTFMVGRGNGENYSYDHVSDLSSMRCINEKTWEDSNTIKSIEIGDLDDEFKAERKVENLRWVGMSSKNLEQSFMEDQKIVPIEDITNFQTNREENEVQAGSEHHHSNNINDFSLGFINDDEPNENFIDEVTTMDDYSSSPSCFEVVEEVKVSHGMFVATRQAAETFFHQIVPSQTLKVHLNPVMAINDNLSTEDAETEETQIMRMENQVSFTKLKANVMGKLIIKPSKTITSAIVFMFALVLMYCAHYLEEQVQIWKPDPEDEDGKEKCCSCANSMKKILRNDKERVWFVGIKSGRGFSVVLKKVGIFLTISLALCTMWANHVTVT 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1119 691 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 228 - -
Dere05g1119 691 FunFam Nac domain-containing protein 86 15 160 - -
Dere05g1119 691 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Dere05g1119 691 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Dere05g1119 691 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Dere05g1119 691 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1119 Dere-ChrDere05 17983257 17988438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1119 1 683 NAC Transcription Factor Family AT1G65910 44.808 1.72e-171 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere05g1119 NAM 3.2e-41 No_clan