Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1098 ATGGGCCCCACAGACCAAGATCACACCCACTCCTTCCTCATGTCAAGAGTCTCAACAAGACAACCCGAGGTTTGGGATATGCGGACCCCACCTCCATGTGCGTTTCTGTTCCCTCCTCGCCACTCTCTGCTCTGTTCTCCAGCTGTACCCATAGCCATATCTTCTCTTCCCTTCTACCTCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCCTACTGTAATTTCCTTTTCCTTCCCCTTCTCTGTCTGTTCCAGAGGAATAAGAATATGAGAAAGAAAACCCACATAAAGTTCGAGCCTTTACATATTTTCCTTTCCGGGTTGTTCTCAGTCCTCGTCGTCGTCGAGTCTCAAGCAAGCCCGAGCCCAGATGCTCCTGTAATGCTAGCTCTCAAGGAGAGCCTCAGCCCCACCGAGTCTCTCAAATGGTCCGATCCAGACCCCTGTAAATGGAATCATGTTGCTTGCTCGGACAATAGGGTCACCCGGATCCAAATCGGTCGTCTGGGCCTTCAAGGTACGCTCCCTCCAAGTCTTCGAAATCTCACTGAGTTACAGCGCTTGGAGCTTCAGTATAATAACATTTCGGGTCCTCTTCCTAGCTTAAATGGTTTGGGTTCTTTGCAAGTGCTTATGCTTAGCAACAACCAATTCAGCTCCATCCCTAGCGATTTTTTCACCGGTATGTCTCAACTTCAATCCGTGGAGATCGACAACAACCCATTTCAGGATTGGGAGATACCTCAGAGTCTCCAAAACGCTTCGGCTCTTCAGAACTTCTCGGCGAACTCGGCTAATATCAGAGGCAAAATACCAGACTTTTTTAATGCAGATGTGTTTCCTGGTTTGAACCTTCTGCATCTTTCTTTCAATAACCTCGAGGGTGGGTTGCCCGCGGCTTTTTCTGGATCACAGATTGAAACTTTGTGGGTTAATGGGCAAAAAAGTGAAGCCATGCTTAGTGGAACTATAGATGTTATACAGAATATGACTTCCTTGACGGAAGTTTGGCTGCATTCAAACGCGTTCTCAGGTCCATTACCAGATTTTTCAGAGTTGAAGGATTTGCAGACCCTGAGTTTAAGGGATAATTCGTTTACTGGTCCTGTTCCAATGTCATTGATGAGTCTTAAATCACTAAAAGTCGTGAATTTGACTAATAATCTGCTTCAAGGGCCTATGCCAGCGTTCAATCCTGGGGTTGAAGTGGACATGAGTACGGATTCGAATAACTTTTGCTTGCCAAGACCTGGGGATTGTGATCCTCGGGTGGATATTCTGCTTTCCATTGTTAAACTTATGGGTTATCCTCGAAGGTTTGCTGAGAATTGGAAGGGGAATGATCCATGTGCTCATTGGCTTGGGATTTCCTGTAGTAATGGGAACGTTACTGTTGTTAACTTTCAGAAGATGGGTCTATCGGGTACGATATCCCCAGAGTTTGCCTCACTCAAATCACTGCAAAGAATCATGCTTGCTGATAACAATCTCACCGGTTTGATTCCAGGAGAGCTCACTACTCTTCCTATGCTTACTGAACTGAATGTTGCAAACAATCAGCTTTTTGGAAAAATCCCAACTTTTAAGAGCAATGTAATCGTTAACACAATCGGTAACAAGGACATAGGGAAGGATAAAAGCAGTTCATCCCCTCCAGGTGCAGTATCTCCAAACCCAACAGGTCCAGGTACAAGGGCGGACAATGGTGGGACTTCTGGAAATGGTGGCAAAAAGTCTTCCCATGTAGTAGTAATTGTAATTGCTGTAGTTGGGAGTCTATTTTTGGTTTTGGTGATTGGTTTCATAGTTTTCTGCTTGTATAGAATGAAGCAAAAGCGGTTAAGCAGGGTACAGAGCCCAAATGCACTGGTAATTCACCCTCGTCATTCTGGATCAGATAACGAAAGTTTGAAAATAACAGTAGCTGGCTCAAGTGTCAGTGTTGGCACTGCTAGCGAAACCCAAACTGTGCCTAGCAGTGAGGCAGGAGGAGACATCCAAATGGTTGAAGCTGGAAACATGGTCATTTCTATACAAGTCCTCAGGAACGTGACTGACAATTTCAGTGAAAAGAATATATTGGGACAAGGAGGTTTTGGAACGGTTTACGAAGGTGAACTCCATGATGGCACAAAAATTGCAGTGAAAAGAATGGGGTCTGGGGCAATAACTGGAAAGGGTGCAGCAGAGTTTCAATCTGAAATTGCTGTTTTGACAAAGGTTCGCCACCGGCATCTTGTTGCTCTTCTTGGTTACTGCTTGGATGGGAATGAAAAGCTTTTGGTGTATGAGTACATGCCTCAGGGTACATTAAGCAGGCATCTGTTTAACTGGCCAGAAGAAGGACTACGACCCCTGGAGTGGAATAGGAGGTTGATTATTGCCTTAGATGTGGCTAGGGGTGTTGAGTACCTTCATGGCTTAGCCCATCAAAGTTTTATACATAGAGACTTAAAGCCTTCAAACATTCTTCTTGGAGACGATATGAGGGCAAAAGTTGCTGATTTTGGTCTTGTGCGTCTTGCTCCAGAAGGAAAAGCCTCAATAGAAACACGAATTGCAGGAACTTTTGGATACTTGGCACCAGAATACGCAGTTACTGGCCGGGTGACAACAAAAGTAGATATATACAGTTTTGGGGTAATTCTGATGGAAATGATTACAGGAAGGAAAGCACTTGATGAAACCCTACCTGAGGACAGCATGCACCTCGTAACATGGTTCCGTAGAATGTGCATAAACAAGGAATCATTCAGCAAGGCCATTGATCCAACAATCGATCGCAACGAGGAAATTATTGCCAGCATTAATACAGTGGCAGAGCTAGCAGGCCACTGCTGCGCACGAGAGCCATATCAGAGGCCAGACATGGGTCATGCTGTGAATGTTCTTTCCTCTCTCGTGGAACTCTGGAAGCCGTCTGATCAAAGTTCTGAAGATATCTATGGTATTGACCTTGACATGTCTTTGCCTCAAGCACTTGAGAAATGGCAGGCTTATGAAGGTAGAGGAGGCCCAATGGAGTCTTCTTCTTCCTCACTCCTTCCAAGCTTGGACAACACGCAGACAAGCATACCTACGCGCCCGTATGGTTTTGCCGAGTCTTTCACATCTGCAGATGGGAGGTGA 3129 0.4535 MGPTDQDHTHSFLMSRVSTRQPEVWDMRTPPPCAFLFPPRHSLLCSPAVPIAISSLPFYLPSSSSSSSSSPYCNFLFLPLLCLFQRNKNMRKKTHIKFEPLHIFLSGLFSVLVVVESQASPSPDAPVMLALKESLSPTESLKWSDPDPCKWNHVACSDNRVTRIQIGRLGLQGTLPPSLRNLTELQRLELQYNNISGPLPSLNGLGSLQVLMLSNNQFSSIPSDFFTGMSQLQSVEIDNNPFQDWEIPQSLQNASALQNFSANSANIRGKIPDFFNADVFPGLNLLHLSFNNLEGGLPAAFSGSQIETLWVNGQKSEAMLSGTIDVIQNMTSLTEVWLHSNAFSGPLPDFSELKDLQTLSLRDNSFTGPVPMSLMSLKSLKVVNLTNNLLQGPMPAFNPGVEVDMSTDSNNFCLPRPGDCDPRVDILLSIVKLMGYPRRFAENWKGNDPCAHWLGISCSNGNVTVVNFQKMGLSGTISPEFASLKSLQRIMLADNNLTGLIPGELTTLPMLTELNVANNQLFGKIPTFKSNVIVNTIGNKDIGKDKSSSSPPGAVSPNPTGPGTRADNGGTSGNGGKKSSHVVVIVIAVVGSLFLVLVIGFIVFCLYRMKQKRLSRVQSPNALVIHPRHSGSDNESLKITVAGSSVSVGTASETQTVPSSEAGGDIQMVEAGNMVISIQVLRNVTDNFSEKNILGQGGFGTVYEGELHDGTKIAVKRMGSGAITGKGAAEFQSEIAVLTKVRHRHLVALLGYCLDGNEKLLVYEYMPQGTLSRHLFNWPEEGLRPLEWNRRLIIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDIYSFGVILMEMITGRKALDETLPEDSMHLVTWFRRMCINKESFSKAIDPTIDRNEEIIASINTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKPSDQSSEDIYGIDLDMSLPQALEKWQAYEGRGGPMESSSSSLLPSLDNTQTSIPTRPYGFAESFTSADGR 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1098 1042 CDD STKc_IRAK 694 967 - -
Dere05g1098 1042 ProSitePatterns Serine/Threonine protein kinases active-site signature. 813 825 IPR008271 GO:0004672|GO:0006468
Dere05g1098 1042 Pfam Leucine rich repeat 481 521 IPR001611 GO:0005515
Dere05g1098 1042 Pfam Leucine rich repeat 184 241 IPR001611 GO:0005515
Dere05g1098 1042 PANTHER OSJNBA0070M12.3 PROTEIN 108 1042 - -
Dere05g1098 1042 FunFam Receptor-like kinase TMK4 122 418 - -
Dere05g1098 1042 ProSiteProfiles Protein kinase domain profile. 688 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1098 1042 FunFam Leucine-rich repeat receptor-like kinase 422 545 - -
Dere05g1098 1042 FunFam receptor protein kinase TMK1 766 983 - -
Dere05g1098 1042 SMART serkin_6 688 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1098 1042 MobiDBLite consensus disorder prediction 1005 1031 - -
Dere05g1098 1042 FunFam receptor protein kinase TMK1 649 765 - -
Dere05g1098 1042 SUPERFAMILY L domain-like 133 530 - -
Dere05g1098 1042 Pfam Leucine rich repeat N-terminal domain 424 459 IPR013210 -
Dere05g1098 1042 Pfam Leucine rich repeat N-terminal domain 122 157 IPR013210 -
Dere05g1098 1042 Gene3D Phosphorylase Kinase; domain 1 648 765 - -
Dere05g1098 1042 Gene3D Transferase(Phosphotransferase) domain 1 766 985 - -
Dere05g1098 1042 SMART LRR_typ_2 205 228 IPR003591 -
Dere05g1098 1042 SMART LRR_typ_2 484 507 IPR003591 -
Dere05g1098 1042 SMART LRR_typ_2 508 530 IPR003591 -
Dere05g1098 1042 SMART LRR_typ_2 182 204 IPR003591 -
Dere05g1098 1042 SMART LRR_typ_2 280 303 IPR003591 -
Dere05g1098 1042 Gene3D Ribonuclease Inhibitor 422 546 IPR032675 -
Dere05g1098 1042 Pfam Protein kinase domain 689 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1098 1042 MobiDBLite consensus disorder prediction 1002 1042 - -
Dere05g1098 1042 SUPERFAMILY Protein kinase-like (PK-like) 668 972 IPR011009 -
Dere05g1098 1042 ProSiteProfiles Leucine-rich repeat profile. 207 228 IPR001611 GO:0005515
Dere05g1098 1042 MobiDBLite consensus disorder prediction 541 577 - -
Dere05g1098 1042 Gene3D Ribonuclease Inhibitor 123 420 IPR032675 -
Dere05g1098 1042 ProSitePatterns Protein kinases ATP-binding region signature. 694 716 IPR017441 GO:0005524
Dere05g1098 1042 MobiDBLite consensus disorder prediction 561 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1098 Dere-ChrDere05 17627432 17631495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1098 173 970 Receptor kinase-like Gene Family AT5G07280 32.848 1.56e-86 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Dere05g1098 Pkinase 1.8e-45 CL0016