Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1094 ATGCCTGCGAAGACAGTGAAGCTGGAAAAGGCCTCAAAGTCTTCTTCTTCTTCTTCTTCTTCGTCGTCGTCGTCGTCGTTGGACGACAGAGAGTATAGGGTCCGGGACGTGAATAGCCGATTGAAATCGACGGGAAGTCGGTTCGAATTGGTAGAAGACGAGTCAAATGAGAGGGATTTCGGTCGCCAAACCTTGCCGTGTGGCATCCGAGTCTGCTCCAAAGACTTAGTTATTCATCCTCATAGCAGGTGGTACCGGGCATGGACAAAGTTCATATTGTTATGGGCAGTGTATTCATCCTTCTTCACCTCGATGGAGTTTGGATTTTTTCGTGGGCTGCCAGAGGATCTCTTTATACTGGACATAATTGGACAATTAGCTTTTCTTGTAGACATTGTTTTGCAGTTCTTTGTCGCATACAGGGACAGTGAGACCTATCGTATGGTCTACAAGCGAACCCCTATAGCTCTGCGGTATGTTAAATCTAGCTTTATCTTTGATCTTCTAGGATGTATGCCTTGGGACATCATTTACAAGGCTTCCGGTAGAAGAGAGGAAGTGAGATACCTTTTGTGGATCAGATTGTATCGGGTGCGCAAAGTCCAAGTTTTTTTCCAGCAGTTGGAAAAGGATGTACGTATCAACTACATGTTTACTAGGATTCTGAGACTTCTAGCGGTAGAGCTGTACTGCACTCATATAGCTGCCTGTATCTTCTACTATTTGGCTACTACACTACCTCCTTCCCAAGAGGGTTACACGTGGATAGGAAGTCTAAAGCTGGGTGACTATAGTTATTCAGATTTCAGAAATATTGATCTTTGGAGGCGCTACACAACATCTTTATATTTTTCTATTATTACTATGGCTACTGTTGGGTATGGAGATATACATGCGGTCAATCTGAGAGAGATGATATTTGTAATGATATATGTGTCATTTGACATGGTTATTGGTGCTTATTTGATTGGTAACATCACGGCATTGATAGTCAGAGGATCAAAGACTGAAAAGTTTAGGGAAAAAATGAAGGATCTCATGAAGTATATGAACAGACACAGACTAGGAATGGACATTCGTGAACAAATAAAAGGCCATGTGTGCTTACAGTACGAGAGTAGCTACGCTGACGCACCTGTCCTTCAAGAACTACCTATTTCTATTCGCGCAAAGATATCCCAGACGTTATATTTGCCATACATTGAAAAGGTTTCTCTGTTTAAGGGTTGCTCTTCAGAATTTATCAATCAGATTGTTGTTCGGCTCCATGAGGAATTCTTTCTCCCAGGAGAAGTGGTAATGGAATACGGAAGTGTTGTAGACCAACTATACTTTGTCTGTCATGGTGTGCTGGAGGAAGTAGGTACAGGTGAAGATGGATCCGAAGAGACTGTTTCCCTTCTAAAACCTTACAGTGTATTTGGAGAAATATCCGTTCTTTGTAACATTCCACAGCCATATACTGTTCGGGTTTGTGAACTATGTAAGCTTCTGCGGCTTGATAAACAATCATTTACAAATATTCTTGACATATACTTCTATGATGGGCGGAAAGTATTAAACAATCTTCTAGAGGGTAAAGAGTCTTTTCATGATAAGCAATTGGGGTCAGACATCACACTTCATATTGGGAAGCAAGAAGCTCAACTTGCTCTGAAGGTTAATAGTGCAGCTTTTCAAGGGGACCTGTATCAGCTAAAAGGTCTGGTTCGAGCTGGAGCTGATCCCAACAAGACTGATTATGATGGAAGGTCACCCTTGCATCTTGCAGCATCTAGAGGATATGAAGATATCACACGTTTCCTTATTCAGGAAGGTGTGGATCTCAATAATAGAGACAACTTTGGTAACACACCGTTACTTGATGCTGTAAAGAATGGGCATGATCGAGTCGCTTCCTTACTTCTTAAAGAAGGGGCCTTGATGAGGATAGACAATGCGGGTAGTTTTCTATGTACGGCTGCTGCAAGGGGTGATTCAGATTATCTTAAAAGGCTATTATCTAATGGCATGGATCCTAACTCAAAAGATTATGATTACCGAACCCCTCTTCATGTTGCTGCTGCTGAAGGTTTATACTTCATGGCAAAGTTGCTATTGGAGGCTGGGGCTAGTGTTTTCACCAAAGACAGATGGGGAAATACCCCACTTGATGATGCCAGGATGTGTGGAAATAAGAATATGATGAAGCTACTAGAAGATGCAAAGTCTGCTCAGTTGTTGGAATTCAGAAATCCTTCCTCAGAATTTACTGATAAAATGCACCCAAAGAAATGCACAGTTTTCCCTTTCCACCCATGGGATCCGAAAGACCACGGAAGATATGGAATTGTACTATGGGTTCCAAACACGATTGAAGAGCTCATAGAAAGAGCAACGGAGCAGCTAGAATTTTCTACTGATTCTTGTGTTTTATCAGAAGATGCTGGTTTAATTACTGATGTGGACATGATCAAGGATGGCCAGAAGCTGTATTTACGGAGCTCATCACAGTTTACAAGTCCATTGAGTGTTGATCAAGGCAGAGACAGGAAGCATCCTGGTGAGTGCGTCTTGCGTCTTGACAAGCCTACGCCATTTGACCCTTAA 2589 0.4218 MPAKTVKLEKASKSSSSSSSSSSSSSLDDREYRVRDVNSRLKSTGSRFELVEDESNERDFGRQTLPCGIRVCSKDLVIHPHSRWYRAWTKFILLWAVYSSFFTSMEFGFFRGLPEDLFILDIIGQLAFLVDIVLQFFVAYRDSETYRMVYKRTPIALRYVKSSFIFDLLGCMPWDIIYKASGRREEVRYLLWIRLYRVRKVQVFFQQLEKDVRINYMFTRILRLLAVELYCTHIAACIFYYLATTLPPSQEGYTWIGSLKLGDYSYSDFRNIDLWRRYTTSLYFSIITMATVGYGDIHAVNLREMIFVMIYVSFDMVIGAYLIGNITALIVRGSKTEKFREKMKDLMKYMNRHRLGMDIREQIKGHVCLQYESSYADAPVLQELPISIRAKISQTLYLPYIEKVSLFKGCSSEFINQIVVRLHEEFFLPGEVVMEYGSVVDQLYFVCHGVLEEVGTGEDGSEETVSLLKPYSVFGEISVLCNIPQPYTVRVCELCKLLRLDKQSFTNILDIYFYDGRKVLNNLLEGKESFHDKQLGSDITLHIGKQEAQLALKVNSAAFQGDLYQLKGLVRAGADPNKTDYDGRSPLHLAASRGYEDITRFLIQEGVDLNNRDNFGNTPLLDAVKNGHDRVASLLLKEGALMRIDNAGSFLCTAAARGDSDYLKRLLSNGMDPNSKDYDYRTPLHVAAAEGLYFMAKLLLEAGASVFTKDRWGNTPLDDARMCGNKNMMKLLEDAKSAQLLEFRNPSSEFTDKMHPKKCTVFPFHPWDPKDHGRYGIVLWVPNTIEELIERATEQLEFSTDSCVLSEDAGLITDVDMIKDGQKLYLRSSSQFTSPLSVDQGRDRKHPGECVLRLDKPTPFDP 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1094 862 Gene3D - 88 331 - -
Dere05g1094 862 ProSiteProfiles Ankyrin repeat region circular profile. 582 614 - -
Dere05g1094 862 FunFam Potassium channel SKOR 86 331 - -
Dere05g1094 862 Gene3D Helix hairpin bin 333 389 - -
Dere05g1094 862 ProSiteProfiles Ankyrin repeat region circular profile. 679 711 - -
Dere05g1094 862 SUPERFAMILY Ankyrin repeat 556 734 IPR036770 -
Dere05g1094 862 MobiDBLite consensus disorder prediction 9 27 - -
Dere05g1094 862 SUPERFAMILY Voltage-gated potassium channels 79 331 - -
Dere05g1094 862 ProSiteProfiles Ankyrin repeat profile. 679 711 IPR002110 GO:0005515
Dere05g1094 862 MobiDBLite consensus disorder prediction 835 862 - -
Dere05g1094 862 CDD CAP_ED 406 520 IPR000595 -
Dere05g1094 862 SMART cnmp_10 406 524 IPR000595 -
Dere05g1094 862 ProSiteProfiles Ankyrin repeat profile. 582 614 IPR002110 GO:0005515
Dere05g1094 862 Pfam Ankyrin repeats (3 copies) 557 640 IPR002110 GO:0005515
Dere05g1094 862 Pfam Ankyrin repeats (3 copies) 652 732 IPR002110 GO:0005515
Dere05g1094 862 Gene3D - 540 645 IPR036770 -
Dere05g1094 862 FunFam Gated outwardly-rectifying K+ channel 621 747 - -
Dere05g1094 862 Gene3D - 646 753 IPR036770 -
Dere05g1094 862 Gene3D Jelly Rolls 390 528 IPR014710 -
Dere05g1094 862 SMART ANK_2a 582 611 IPR002110 GO:0005515
Dere05g1094 862 SMART ANK_2a 679 708 IPR002110 GO:0005515
Dere05g1094 862 SMART ANK_2a 712 741 IPR002110 GO:0005515
Dere05g1094 862 SMART ANK_2a 615 644 IPR002110 GO:0005515
Dere05g1094 862 SMART ANK_2a 646 675 IPR002110 GO:0005515
Dere05g1094 862 MobiDBLite consensus disorder prediction 1 32 - -
Dere05g1094 862 Pfam Ion transport protein 86 331 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dere05g1094 862 PANTHER POTASSIUM CHANNEL AKT1 41 828 IPR045319 GO:0005249|GO:0006813
Dere05g1094 862 FunFam Potassium channel KAT2 394 531 - -
Dere05g1094 862 ProSiteProfiles Ankyrin repeat region circular profile. 615 640 - -
Dere05g1094 862 ProSiteProfiles Ankyrin repeat profile. 646 678 IPR002110 GO:0005515
Dere05g1094 862 Pfam KHA, dimerisation domain of potassium ion channel 757 826 IPR021789 -
Dere05g1094 862 PRINTS EAG/ELK/ERG potassium channel family signature 121 131 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere05g1094 862 PRINTS EAG/ELK/ERG potassium channel family signature 278 295 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere05g1094 862 PRINTS EAG/ELK/ERG potassium channel family signature 322 331 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere05g1094 862 PRINTS EAG/ELK/ERG potassium channel family signature 230 240 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere05g1094 862 PRINTS Ankyrin repeat signature 583 598 IPR002110 GO:0005515
Dere05g1094 862 PRINTS Ankyrin repeat signature 695 709 IPR002110 GO:0005515
Dere05g1094 862 ProSiteProfiles Ankyrin repeat profile. 615 647 IPR002110 GO:0005515
Dere05g1094 862 ProSiteProfiles KHA domain profile. 758 844 IPR021789 -
Dere05g1094 862 Pfam Cyclic nucleotide-binding domain 426 510 IPR000595 -
Dere05g1094 862 SUPERFAMILY cAMP-binding domain-like 334 523 IPR018490 -
Dere05g1094 862 ProSiteProfiles cAMP/cGMP binding motif profile. 406 526 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1094 Dere-ChrDere05 17575199 17597208 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1094 653 732 Ion Channels AT5G37500 33.333 2.17e-08 56.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1094 05 17575199 17597208 Dere05g1094 05 17575199 17597208 ECH