Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1079 ATGGCCAAAACCATCCCTCCTCTCTCACTTCGCTTCACCTTCTTTCTCCTCCTCACCATTCTCTGCAACGCTCCCTCTTCCCTTTCGTCCTCCATAGATTCCTTCGTCTTCGCAGGCTGCACCCAACAGAAATACTCACCGGACTCTCCCTACCGCTCCAACCTCGACTCTTTACTCACCTCCCTCCTCAACTCCGCCACCTACTCCTCCTACGGCAACTTCACCGTCCTCGGCTCCGCCGTCATCTCCGGCCTCTACCAGTGCCGCGGGGACCTCTCCATGCCCGACTGCTCAGCCTGCGTCTCCCGCTCCATCGCCCGCGTCGCCGCCCTCTGCCCCGACACCTGCGGTGCTGCGATGCAGCTCGAGGGCTGCTTCCTCAAGTACGACGACGCCACCTTCGTGGGCGTGGAGGACAAGACCGTCATTTTTAAGAAGTGCGGGCCCTCTCTTGGCAATGTGAATGGTTATCTGGAGAGCAGAGACGCGGTGCTATATGGGTTGGCTGGGTCGGGGGGGTATTTCCGGGTTGGAGGGTCGGGTAAGGTGCAGGGTATGACCCAGTGCACCGGCGATCTGGGATTCGCGGAGTGCCAGGATTGTCTCTCGGAGGCGATCGGACGGCTCAGAAGCGACTGTGGAACTGCTGATTACGGCGACGTTTTCTTGGGCAAGTGTTACGCGAGGTACTCTCTCGGTGGGGCCCACGATTACTCCAAGGCTAACGCAGGTAAATCAAGACATGGGGGTGGAAAGACATTTGTTATTATTATTGGATTATTAGCAGGATTAGCTATACTCATTATTTTCTTTGCCTTCTTGAAGAGGATTTGTACTGAAGGCCATGGTAAATAA 855 0.5614 MAKTIPPLSLRFTFFLLLTILCNAPSSLSSSIDSFVFAGCTQQKYSPDSPYRSNLDSLLTSLLNSATYSSYGNFTVLGSAVISGLYQCRGDLSMPDCSACVSRSIARVAALCPDTCGAAMQLEGCFLKYDDATFVGVEDKTVIFKKCGPSLGNVNGYLESRDAVLYGLAGSGGYFRVGGSGKVQGMTQCTGDLGFAECQDCLSEAIGRLRSDCGTADYGDVFLGKCYARYSLGGAHDYSKANAGKSRHGGGKTFVIIIGLLAGLAILIIFFAFLKRICTEGHGK 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1079 284 FunFam cysteine-rich repeat secretory protein 3 32 134 - -
Dere05g1079 284 Gene3D - 159 233 IPR038408 -
Dere05g1079 284 Gene3D - 32 134 IPR038408 -
Dere05g1079 284 ProSiteProfiles Gnk2-homologous domain profile. 135 235 IPR002902 -
Dere05g1079 284 ProSiteProfiles Gnk2-homologous domain profile. 33 134 IPR002902 -
Dere05g1079 284 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 12 278 - -
Dere05g1079 284 Pfam Salt stress response/antifungal 176 231 IPR002902 -
Dere05g1079 284 Pfam Salt stress response/antifungal 40 131 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1079 Dere-ChrDere05 17316351 17317894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1079 20 232 Pollen Coat Proteome AT4G20670 25.630 3.48e-14 69.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1079 05 17316351 17317894 Dere05g1079 05 17316351 17317894 CCT
Dere05g1079 05 17316351 17317894 Dere05g1079 05 17316351 17317894 ECH