Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1077 ATGAAGTCTCTGCTGCTGCCGCTGAGCTTCTTGGTCCTTGTTTTCCCGCTCTTTCTGTTCGCCCTCGTCGGCGCAGATCTAACTTCTGATAGAGCTGCCTTGGTGGCTTTGCGCGCCGCCGTGGGTGGCCGTTTGCTTTTCTGGAACCTCTCTGAGACGAGTCCTTGCAATTGGACTGGGGTGTTCTGTGGTGACAACAGGGTCTATATGTTGCGGCTTCCGGCTATGGGTCTTTCCGGGAGGCTTCCACTGGGAATTGGCAATCTCACTCAGCTCCAGACTCTGTCTCTTCGCGTCAACGCGCTCTCTGGGCCAATTCCAGACGACTTTGCTAATCTTGTTGATCTTCGGAACCTTTATTTGCAGCAAAATTTCTTCTTTGGTGAAATCCCTGATTTCCTTTATGGTATGCAGAACTTGGTTCGTTTGAATTTAGCTAACAACAATTTCAGTGGAGAGATCTCGCCCAAATTTAATAACCTCTCGAGGTTGGCTACCCTCTATTTGGAGAACAACAACCTCACTGGGTCCATTCCTGACCTGAATGCTCCCCCTCTTGACCAGTTCAATGTTTCGTCGAATCAGCTAAACGGGTCCATTCCCGCAAGGTTTTCGCGTTTAGATGCCAGTTCTTTTTCAGGGAATTCGCTTTGTGGGAAGCCCTTGCAAGAATGCCCTGGAACGGAGAGTGGGAAGAAGAAGAAGAAGAAGTTAACTGGTGGAGCAATTGCAGGAATTGTAATTGGTTCTTTAGTCGTACTTTTGTTGATTCTACTTCTTCTGTTCTTCTTGTGTCGGAAGAGTAGCAGTAAAGGCAAAAGTTCGAGGGATACAACACCGGGACAGAACGTTGAGGCTGAAATTCCCCAAGAAAAAACAACTAGAGATATTGAGAATGCTGGAGCTAGTATTTCAGCAACAGCCAGAGGTGGTGATTCTAAGGATGGTAGGAGTAAGAGATTAGTTTTTTTTGGTAATGTCAGCAAAGTGTTTGATCTTGAAGATTTATTAAGGGCGTCAGCAGAAGTACTGGGCAAGGGCACATTTGGAACCACATATAAGGCTACGTTGGAAATGGGGATGGTCGTGGCAGTGAAGAGGTTGAAGGATGTAACTGCAACAGAAAGCGAATTTAGAGAGAAAATAGAGGTAGTAGGGAAGATGGTTCATGAGAACTTGGTACCGCTCAGAGCTTACTATTATAGCAGAGAAGAAAAACTTCTTGCCTATGATTACATGCCCATGGGAAGCTTATCTGCTCTTTTACACGCTAATAACGGAGCTGGAAGAACTCCACTAAACTGGGAAACAAGGTCTGGCATCGCCCTTGGTGCTGCCCGTGGGATTGCATACATACATTCACATGGCCTTTCTGCCTCCCATGGAAATATCAAGTCATCAAATATCCTTCTCACCAGATCTTTTGAAGCTCGAGTTTCTGATTTTGGCCTTGCTCATCTTGCACTCCCAACCTCTACACCTAACCGCATTTCTGGTTACCGAGCCCCAGAGGTCACAGATGCTCGCAAAATATCCCAAAAAGCAGATGTCTATAGCTTTGGTATAATGCTTTTGGAGCTGCTTACTGGAAAACCTCCAACACATTCCCCGTTGAATGAAGAAGGGGTCGACCTCCCGAGATGGGTCCAATCTATCGTTCGAGAGGAATGGAACACTGAGGTTTTTGACATGGAGCTTCTCAGATACCAGAATGTCGAGGAGGAAATGGTCAAGCTTTTGCAGCTTGCACTTGAATGTACTGAACAGTATCCTGACAAGCGACCCTCAATGGATGTGGTGGCGAGCAGAATTGAGGAGATATGTCATGCTAGTTTAGAGAAAGAGGAGGATAAAATTCATTCTTTGAAAGATACAGACAACGGATTTTCCCCACCGTAG 1899 0.4613 MKSLLLPLSFLVLVFPLFLFALVGADLTSDRAALVALRAAVGGRLLFWNLSETSPCNWTGVFCGDNRVYMLRLPAMGLSGRLPLGIGNLTQLQTLSLRVNALSGPIPDDFANLVDLRNLYLQQNFFFGEIPDFLYGMQNLVRLNLANNNFSGEISPKFNNLSRLATLYLENNNLTGSIPDLNAPPLDQFNVSSNQLNGSIPARFSRLDASSFSGNSLCGKPLQECPGTESGKKKKKKLTGGAIAGIVIGSLVVLLLILLLLFFLCRKSSSKGKSSRDTTPGQNVEAEIPQEKTTRDIENAGASISATARGGDSKDGRSKRLVFFGNVSKVFDLEDLLRASAEVLGKGTFGTTYKATLEMGMVVAVKRLKDVTATESEFREKIEVVGKMVHENLVPLRAYYYSREEKLLAYDYMPMGSLSALLHANNGAGRTPLNWETRSGIALGAARGIAYIHSHGLSASHGNIKSSNILLTRSFEARVSDFGLAHLALPTSTPNRISGYRAPEVTDARKISQKADVYSFGIMLLELLTGKPPTHSPLNEEGVDLPRWVQSIVREEWNTEVFDMELLRYQNVEEEMVKLLQLALECTEQYPDKRPSMDVVASRIEEICHASLEKEEDKIHSLKDTDNGFSPP 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1077 632 Gene3D Ribonuclease Inhibitor 183 229 IPR032675 -
Dere05g1077 632 ProSiteProfiles Protein kinase domain profile. 338 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1077 632 Gene3D Transferase(Phosphotransferase) domain 1 413 629 - -
Dere05g1077 632 PANTHER OS05G0588300 PROTEIN 11 609 - -
Dere05g1077 632 FunFam Probable inactive receptor kinase At1g48480 413 615 - -
Dere05g1077 632 Coils Coil 569 589 - -
Dere05g1077 632 ProSitePatterns Protein kinases ATP-binding region signature. 344 366 IPR017441 GO:0005524
Dere05g1077 632 ProSiteProfiles Leucine-rich repeat profile. 163 185 IPR001611 GO:0005515
Dere05g1077 632 Gene3D Ribonuclease Inhibitor 27 182 IPR032675 -
Dere05g1077 632 MobiDBLite consensus disorder prediction 274 288 - -
Dere05g1077 632 FunFam Probable inactive receptor kinase RLK902 27 182 - -
Dere05g1077 632 CDD STKc_IRAK 344 607 - -
Dere05g1077 632 SUPERFAMILY L domain-like 45 210 - -
Dere05g1077 632 Gene3D Phosphorylase Kinase; domain 1 306 412 - -
Dere05g1077 632 MobiDBLite consensus disorder prediction 270 315 - -
Dere05g1077 632 FunFam pollen receptor-like kinase 1 307 412 - -
Dere05g1077 632 Pfam Leucine rich repeat N-terminal domain 29 63 IPR013210 -
Dere05g1077 632 Pfam Protein kinase domain 341 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1077 632 SUPERFAMILY Protein kinase-like (PK-like) 342 603 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1077 Dere-ChrDere05 17277865 17280635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1077 26 607 Receptor kinase-like Gene Family AT1G48480 58.987 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dere05g1077 Pkinase 9.9e-38 CL0016