Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1070 ATGTCGGTATCGTGCGGGGTTGAGTGCGTCTTAATACTTGGCTGCGCTCGCTGGATGTGGAAGCGCTGCACCTATATCGGCTCCTACGACAGCTCCACGTGGCCTTCCTCCACTGCCGACGAGTTCGAACCCGTCCCCCGGGTGTGCCGATTGGTCCTCGCCATCTACGAGCCCGATCTCCGCAACCCACAATACCAACCTGCCGGTGGGTTTCGTCTCAACCCCGACTGGGTCGTGAAGCGCGTCGCCTATGAGCAGACGGATGGCCGCGCGCCGCCGTATATAATTTACACCGATCACGACCACCACGAGATTGTGCTAGCTGTACGCGGGCTCAATCTCGCCAAAGAGAGCGATTACAAGCTGCTTTTGGACAATCGCTTGGGTATGCAGAAGTTTGATGGTGGCTATGTCCATCACGGTCTGTTAAAATCTGCTGTTTGGCTGCTCAAACAGGAATCTGAGACCCTGAAGCGCTTGTGGATTGAAAGTGGGTCTCACTATAAAATGGTGTTTGCTGGGCATTCTTTGGGTTCTGGTGTGGTTTCTTTGTTGACGATAATGGTTGTGAATCATAGGGACCTATTGGGAGGGATTCCTCGCGACAAGATTCAATGTTATGCGATAGCACCTGCGAGGTGCATGTCACTGAATTTGGCGGTCAAATATGCGGATGTCATACATTCTATTGTGTTGCAGGATGATTTCTTACCAAGAACGGCCACTCCATTGGAAGATATATTCAAGTCAATCTTCTGCTTGCCCTGCCTATTATTCTTGGTTTGCTTGAGGGACACCTTCATACCAGAAGGAAGAAAGCTTAGAGATCCAAGAAGACTTTATGCACCTGGACGAATGTACCATATTGTGGAGAGAAAATTTTGCAGATGTGGGAGGTTCCCTCCCGAAGTGAGGACTGCTATTCCAGTTGATGGGAGATTTGAGCATATTGTCTTGTCCTGTAATGCAACATCTGACCATGGAATTATTTGGATTGAAAGAGAAGCAGAGAAGGCTTTAAATAGAATGAAAGATGGCAGCTCCGAGACTGCGACTGCTCCTCCAACCAGACAGAAGATGGAGAGGTTGCAGACCATTGAGAAAGAGCATAAAGATGCTTTGGAAAGAGCTGTTAGCTTAAATGTGCCTCATGCGGTGGAAGCGGCAGAGGATGAAGAAGCCTCTGAGAAGAAGGAAGGAGAAGGAGAGCCTTCCAACAATGAGAGCAAAGATGGCATGAGTCACAAATCCAAGTCAAGTAGTGGAAGGTTGAACTGGGATGACGTTGTTGAACATCTCTTCAAGAAGGGTGAGTCAGGAGATCAGCGTCTCAAAAGTGATACAGCAACAAGTGTCCCAAAATAG 1365 0.4879 MSVSCGVECVLILGCARWMWKRCTYIGSYDSSTWPSSTADEFEPVPRVCRLVLAIYEPDLRNPQYQPAGGFRLNPDWVVKRVAYEQTDGRAPPYIIYTDHDHHEIVLAVRGLNLAKESDYKLLLDNRLGMQKFDGGYVHHGLLKSAVWLLKQESETLKRLWIESGSHYKMVFAGHSLGSGVVSLLTIMVVNHRDLLGGIPRDKIQCYAIAPARCMSLNLAVKYADVIHSIVLQDDFLPRTATPLEDIFKSIFCLPCLLFLVCLRDTFIPEGRKLRDPRRLYAPGRMYHIVERKFCRCGRFPPEVRTAIPVDGRFEHIVLSCNATSDHGIIWIEREAEKALNRMKDGSSETATAPPTRQKMERLQTIEKEHKDALERAVSLNVPHAVEAAEDEEASEKKEGEGEPSNNESKDGMSHKSKSSSGRLNWDDVVEHLFKKGESGDQRLKSDTATSVPK 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1070 454 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 447 - -
Dere05g1070 454 CDD Lipase_3 41 239 - -
Dere05g1070 454 MobiDBLite consensus disorder prediction 428 443 - -
Dere05g1070 454 SUPERFAMILY alpha/beta-Hydrolases 40 242 IPR029058 -
Dere05g1070 454 Gene3D alpha/beta hydrolase 36 251 IPR029058 -
Dere05g1070 454 Pfam Lipase (class 3) 106 241 IPR002921 GO:0006629
Dere05g1070 454 MobiDBLite consensus disorder prediction 380 454 - -
Dere05g1070 454 MobiDBLite consensus disorder prediction 386 417 - -
Dere05g1070 454 Pfam Lipase 3 N-terminal region 7 70 IPR005592 GO:0016042
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1070 Dere-ChrDere05 17137975 17141289 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1070 1 341 Miscellaneous Gene Families AT5G37710 75.439 0.0 566