Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1035 ATGGGGTTTTCCCAACGAACCTGCACTGATTCTTGGGAGCCTTCAAATGTACAAAATGCTCCTGGCGCTTCCTATACAGCTACGGATCACTACTACGACTATAATAAGCTCAAATTCAGAAGTATTTGGAGAAAAATGGTCTGGAAGATTGGGTTTGCTTGTATTGTCCCGCCTCGTCGCCGGCGGAACACGGGGATGATTCAAGGCCAAGACAAAAATAAGGCTTGGCTACTGGCGGAGTCCGGTGGGTGTGCGGCGGAGTCGACGAATGTCGACCCACAATCGGTTCATTCGTCTTTCAGGTTCAACTTATATTCTCAAGTTGAACTGGAATCCATGAACATGAGTTCTTCCGCTGCTGCGACGGTTTTGATGGTGAATTTGGACAATGGGGTGAGTGAATCTCGAGCTCCGGAGCTGAAATGGCGGAGAATGGAGTCATTGGGGAAAAACATATTTCCAGTGACCAATAGTTTGATCAGATTCAACTATAGTGAAATCCAGTCCGCTACTCGAAATTTTTCCAAAGGCAGAGTATTAGGGAGAGGGGCCTTGAGCTGTGTTTTTAGAGGAAGAGTTGGGCTTCTGAGGACTGCAGTAGCAATTAAACGATTGGACAAGGAAGACAAGGAGTCTGCGAAGGCGTTTTGTAGAGAATTGATGATTGCTAGTTCTCTTCACAACCCAAACGTTGTTCCCCTTGTGGGGTTTTGTACTGACCCAGAGGAGGGTATGTTTTTGGTGTACAAATTTGTCTCAGGAGGCAGCTTGGAGCGTTACTTGCATGGGAGAAAGAAGGGTGTAAAGGGTAGTCCACCACTGCCTTGGTCTGTGAGGTATAAAGTTGCAATTGGGATTGCGGAAGCCGTGGCATATCTGCATAATGGAACAAATAAATGTGTTGTTCACCGAGACATTAAGCCCTCAAACATTCTTCTTTCCTCTAGAAAGACTCCCAAGTTATGTGATTTTGGATTAGCTACGTGGACTTCTGCACCTTCAGTACATTTCCTTTGCAAAACTGTCAAAGGAACATTTGGTTATTTGGCTCCTGAGTATTTCCAACATGGGAGAGTATCAGATAAGACTGATGTTTATGCTTTTGGAGTGGTGTTATTGGAACTCATAACTGGCCGGAAGCCAATCGAAGCAAAAAGGCCACCGGGAGAGGAGAATTTGGTCTCATGGGCTAAACCATTGCTTCAGAAAGGCAAAGAAGCCATTGAAGAGTTGATTGATCCTCATCTCAAGTGCAATATGAAATCCTCAAAACAGATAGCTCGAATGATCGACGCTGCAGCTGCCTGTGTCACAAATGAAGAATCTCGGAGGCCTGGCATAAATGAGATTGTTGCAGTACTGAAAGGTGAAGAACATGTTTTCTCTAAAAGGAGGAAGTCTGCTTTTATTGGGAATGGATCCGTTATTGATTGTTATCCTCAGTTACAAGAAACAAATAATGAGATGAAAAGTCACTTCGCCTTGGCAATGCTAGGTGTTTCAGAGTTTGAGGATGACGATGGTCTCTACGGTCGATAA 1539 0.4464 MGFSQRTCTDSWEPSNVQNAPGASYTATDHYYDYNKLKFRSIWRKMVWKIGFACIVPPRRRRNTGMIQGQDKNKAWLLAESGGCAAESTNVDPQSVHSSFRFNLYSQVELESMNMSSSAAATVLMVNLDNGVSESRAPELKWRRMESLGKNIFPVTNSLIRFNYSEIQSATRNFSKGRVLGRGALSCVFRGRVGLLRTAVAIKRLDKEDKESAKAFCRELMIASSLHNPNVVPLVGFCTDPEEGMFLVYKFVSGGSLERYLHGRKKGVKGSPPLPWSVRYKVAIGIAEAVAYLHNGTNKCVVHRDIKPSNILLSSRKTPKLCDFGLATWTSAPSVHFLCKTVKGTFGYLAPEYFQHGRVSDKTDVYAFGVVLLELITGRKPIEAKRPPGEENLVSWAKPLLQKGKEAIEELIDPHLKCNMKSSKQIARMIDAAAACVTNEESRRPGINEIVAVLKGEEHVFSKRRKSAFIGNGSVIDCYPQLQETNNEMKSHFALAMLGVSEFEDDDGLYGR 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1035 512 PANTHER OS08G0249100 PROTEIN 122 466 IPR046958 -
Dere05g1035 512 FunFam Putative receptor-like serine/threonine-protein kinase 252 469 - -
Dere05g1035 512 SMART serkin_6 174 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1035 512 ProSitePatterns Serine/Threonine protein kinases active-site signature. 301 313 IPR008271 GO:0004672|GO:0006468
Dere05g1035 512 ProSiteProfiles Protein kinase domain profile. 174 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1035 512 Pfam Protein kinase domain 175 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1035 512 SUPERFAMILY Protein kinase-like (PK-like) 154 454 IPR011009 -
Dere05g1035 512 Gene3D Phosphorylase Kinase; domain 1 158 251 - -
Dere05g1035 512 Gene3D Transferase(Phosphotransferase) domain 1 252 469 - -
Dere05g1035 512 FunFam probable serine/threonine-protein kinase PBL7 135 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1035 Dere-ChrDere05 16690258 16693143 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1035 161 510 Trihelix Transcription Factor Family AT1G70460 39.216 4.40e-71 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Dere05g1035 Pkinase 1.4e-44 CL0016