Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1008 ATGGGTGATGAAATTGATTTGACTGGTGATGGGGGCGTCATAAAGACCATTGTGAGAAAAAGCAAAATTGATGCCGTGGGTCCTACAGAAGATTTTCCTCTTGTTGATGTTCATTATGAAGGCACACTTGCTGAGACTGGTGAAGTATTTGATACTACACATGAGGATAACACTGTATTCTCTTTTGAGCTTGGAAAGGGAAGTGTTATCAAGGCTTGGGACATTGCAGTGAAGACCATGAAGGTTGGAGAAATTGCAAAAATAACTTGCAAGCCGGAATATGCATATGGCAGTGCGGGATCTCCACCAGATATCCCCCCAGATGCGACACTTGTTTTTGAAGTTGAGCTAGTTGCTCGTAGGCCACGGAAGGGTTCCAGTCTGGGAAGTGTTTCGGAGGAGAGGGCTAGGCTAGAAGAGCTGAAGAAGCAGAGAGAGATTGCTGCTGCTGCCAAAGAGGAGGAGAAAAGGAAGAGAGATCAAGCAAAAGCTGCCGCTGCTGCTCGTGCGCAAGCCAAGTTAGAGGCCAAAAAAGGTCAAGGAAAAGGTAAATCTAAAGCAAAGTAG 567 0.4586 MGDEIDLTGDGGVIKTIVRKSKIDAVGPTEDFPLVDVHYEGTLAETGEVFDTTHEDNTVFSFELGKGSVIKAWDIAVKTMKVGEIAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVARRPRKGSSLGSVSEERARLEELKKQREIAAAAKEEEKRKRDQAKAAAAARAQAKLEAKKGQGKGKSKAK 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1008 188 MobiDBLite consensus disorder prediction 150 164 - -
Dere05g1008 188 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 34 118 IPR001179 GO:0003755
Dere05g1008 188 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 4 181 - -
Dere05g1008 188 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 32 121 IPR001179 GO:0003755
Dere05g1008 188 Coils Coil 131 171 - -
Dere05g1008 188 MobiDBLite consensus disorder prediction 150 188 - -
Dere05g1008 188 FunFam Peptidylprolyl isomerase 1 120 - -
Dere05g1008 188 SUPERFAMILY FKBP-like 8 123 - -
Dere05g1008 188 Gene3D - 2 120 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1008 Dere-ChrDere05 16241168 16243680 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1008 5 175 Calmodulin-binding Proteins AT5G48570 32.955 1.75e-11 60.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1008 05 16241168 16243680 Dere05g1008 05 16241168 16243680 ECH