Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0996 ATGACTTCAAACTCAGATGGCAAACAAAAAACATCTTCATGGACAGCGAGACAGAACAAATTGTTTGAACGTGCACTTGCGCTCGTCGATGAAGACGCACCATATCGCTGGCATTTAATTGCTAAAATGGTTGGTGATAATAAGTCAGCTGAAGAAGTGCTGAAGCATTATCAAATTCTCTTAGAGGATCTTGCGAATATAGAGTCCGGCCTTGTTGACATTCCCAATTATGAAGATAACATTTTTGATGAAGAAGAATACTTCTAG 267 0.3895 MTSNSDGKQKTSSWTARQNKLFERALALVDEDAPYRWHLIAKMVGDNKSAEEVLKHYQILLEDLANIESGLVDIPNYEDNIFDEEEYF 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0996 88 CDD SANT 13 61 IPR001005 -
Dere05g0996 88 SMART sant 10 63 IPR001005 -
Dere05g0996 88 Pfam Myb-like DNA-binding domain 11 58 IPR001005 -
Dere05g0996 88 SUPERFAMILY Homeodomain-like 12 69 IPR009057 -
Dere05g0996 88 Gene3D - 5 74 - -
Dere05g0996 88 FunFam Transcription factor SRM1 6 74 - -
Dere05g0996 88 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 80 IPR044636 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0996 Dere-ChrDere05 16099518 16099784 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere05g0996 Myb_DNA-binding 9.5e-06 CL0123