Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0991 ATGCTGCATAGCGCAGCGGGGGGTCAGTGGGCACCTTGTCAGGAGGTGCAGACAGGGACGTTTACCTCTCGACACTTTTCTTTCTTTTCGCTGTGCCTCGCATCCGAATATGCTCGAACCTCAATACCCAAAACCCCTTCCCACGAGGTGCTCGAGCCCTTGTCCTACTACAAGTTTCGATTCGCGCGTCAGAGTTCTGTCATGGTATGTCATTCACAGGCCCAGATAGATATTGGTGGTAAAATCAGCCCCGGGAAACCCTGGGGGACCCGTATCCTCTCTCTCTCTCTTCTACTGTTCTTATCAGCTTACCCGTACCAATCTGAGTCCCTTTTAGACGCATACATACAGGAGGTTTCATTTCATCGCAGGTTTTCAAACATGGCGAATCGGTGGTGGGCTGGTAACATGGCAGTGAGACCCACAGACCCCTTGTCGTCTCCTCCATCACTTCAGCTGAGAAACCCAGAAGATGACCATGGTGGATTGAATCGGCTCGGGCCTAGACGAGAGCAAGAATTCCTGGAAAGCACCAATAACAACACCACCCCAACCAATAGCAGCAATAGCAACACTAACGCCAACACAAACACCACCTCACAGAGCCAGAACGCCGATGACGACGAGAGCCGAGACAACGACCGTGAAGCTGAGGACCAAAACCCAGGTAGCCACGAGACCGCCGAGCCCGGCAGTAGTGGCCGCCGGCCCCGAGGCCGCCCACCTGGGTCGAAGAACAAGCCGAAGCCGCCCGTCGTTGTAACCAAGGAGAGCCCCAATGCCCTCCGAAGCCATGTGTTGGAAATCTGCAGCGGCAGCGATGTTGCTGAGAGCCTTGCCACCTTTGCGAATCGGAGGCATCGAGGGGTCTCGGTGCTTAGCGGAAGTGGCATTGTAACCAATGTCACGCTGCGGCAACCGGCGGCACCTGGTGGGGTTATCACACTACATGGAAGGTTCGAGATTCTGTCTCTGTCCGGTGCGTTTTTGCCAGCCCCGTCACCTCCCGGGGCCACCGGGCTTACTGTGTATTTAGCTGGCGGACAAGGGCAGGTTGTTGGAGGAGCTGTAGTGGGTTCACTAGTAGCATCAGGTCCTGTATTGGTTATTGCAGCTACATTTGCTAATGCTACCTATGAAAGGTTGCCTTTAGAGGATGAACCGGCCGGGGAAGAAGTTGAAGTGCAAGCACAGCAGCAATCAGGAGTAAATTCAGGAGCTGCTGGGCCTGCAGCATCTCAAGGTTTGAATGAACAAGCTTCAGTGCCTGTGTTCAGTAGCCTGCCTCCAAATTTGCTACCAAATAATGATCAAATGCCACATGATGTATTCTGGGGACCTCAAGCTCGCCCTCCTCCTTCTTACTGA 1368 0.5395 MLHSAAGGQWAPCQEVQTGTFTSRHFSFFSLCLASEYARTSIPKTPSHEVLEPLSYYKFRFARQSSVMVCHSQAQIDIGGKISPGKPWGTRILSLSLLLFLSAYPYQSESLLDAYIQEVSFHRRFSNMANRWWAGNMAVRPTDPLSSPPSLQLRNPEDDHGGLNRLGPRREQEFLESTNNNTTPTNSSNSNTNANTNTTSQSQNADDDESRDNDREAEDQNPGSHETAEPGSSGRRPRGRPPGSKNKPKPPVVVTKESPNALRSHVLEICSGSDVAESLATFANRRHRGVSVLSGSGIVTNVTLRQPAAPGGVITLHGRFEILSLSGAFLPAPSPPGATGLTVYLAGGQGQVVGGAVVGSLVASGPVLVIAATFANATYERLPLEDEPAGEEVEVQAQQQSGVNSGAAGPAASQGLNEQASVPVFSSLPPNLLPNNDQMPHDVFWGPQARPPPSY 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0991 455 MobiDBLite consensus disorder prediction 158 172 - -
Dere05g0991 455 MobiDBLite consensus disorder prediction 387 455 - -
Dere05g0991 455 ProSiteProfiles PPC domain profile profile. 259 397 IPR005175 -
Dere05g0991 455 MobiDBLite consensus disorder prediction 205 223 - -
Dere05g0991 455 MobiDBLite consensus disorder prediction 394 434 - -
Dere05g0991 455 MobiDBLite consensus disorder prediction 143 259 - -
Dere05g0991 455 Gene3D - 262 400 - -
Dere05g0991 455 FunFam AT-hook motif nuclear-localized protein 262 389 - -
Dere05g0991 455 Pfam Plants and Prokaryotes Conserved (PCC) domain 263 375 IPR005175 -
Dere05g0991 455 MobiDBLite consensus disorder prediction 173 204 - -
Dere05g0991 455 SUPERFAMILY AF0104/ALDC/Ptd012-like 259 387 - -
Dere05g0991 455 CDD DUF296 263 345 IPR005175 -
Dere05g0991 455 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 192 446 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0991 Dere-ChrDere05 16039354 16042810 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0991 128 455 AT-hook Motif Nuclear Localized (AHL) Family AT3G55560 53.824 7.21e-76 238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g0991 05 16039354 16042810 Dere05g0991 05 16039354 16042810 CCT
Dere05g0991 05 16039354 16042810 Dere05g0991 05 16039354 16042810 ECH