Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0984 ATGGCTGGGATTTGCTGTGGGGTTGTTGGAGAAGGAGAGACCCCAACTCCGATAGAGCCGGGCCGACCTTCTCGGCGCCGGAGATTGGACCTACTGCCCTTAAAGTACATAGCTGACATGGCAGTGCTGCACCCCGAGACCGAGCTGAAGCGCCCAAAGTTGGATCTCTGTACTACTACTCCGACACAACCTAGGGACTGCGTAAACGCAGTTGAGAACTGTGAATCTAGCGGTGTTAAGAACGGAGAGGAACATAATAAAGAAGAACCTAAAGAAGATGAAGCTCGGTCGACTGTTTCTTTGTTAAATTCAACTGCTACAGAAGAATCTGGTAATGAGGACGCTAATGAGTGTCCAAAGTTTGGGGTAACATCTGTTTGTGGTAGGAGAAGGGACATGGAAGATGCGGTTTCAGTTCGTCCATCTTTCTGCCAAGAACTAGGTCAAAACCAGAAAGAGCTTCACTACTTTGGTGTGTTCGACGGCCATGGTTGCTCTCATGTAGCGACGATCTGTAAGGATAGGCTACATGAGATTGTGAAGGAAGAGATGAGTGGATCCCGAGAGGATTTGGAATGGAAGTCCGTGATGGAACAGAGTTTTGCTAGGATGGACGAGGAGGTGCAGAACTGGAGCCAGAGCAACCAAAGCTCCACTTGCAGGTGCGAGCTTCAGACTCCTCACTGCGACGCCGTCGGATCTACGGCGGTTGTTGCCGTCGTTACACCGGACAAGATTGTCGTCTCCAACTGCGGCGACTCCCGCGCCGTCCTGTGCCGCAACGGCGTCACCATCCCCCTCTCGTCCGATCACAAGCCTGACCGGCCCGACGAATTGCTCCGAGTCCAAGCCGCCGGAGGGCGGGTGATTTACTGGGACGGTCCGAGGGTGCTGGGAGTTTTGGCAATGTCCAGAGCAATAGGTGACAATTATCTGAAACCCTACGTGATATCGGAGCCGGAGGTGACGGTAACGGAGCGGACGGACGAAGATGAGTGTCTGATACTGGCGAGTGATGGGCTATGGGACGTGGTATCAAACGATACCGCATGTGGGGTGGTGCGGATGTGCCTGAAGGTGCAGAAGCCACCGTCGCCTCCAGGGTCGCCGGGAAGCGACATGGCGGTGTGCTCCGCCGCAGATGGGTCAGACAAGGCATGCTCGGACGCGTCCATTCTGCTGACGAAGTTGGCGTTGGCGAGGCATAGTACGGACAATGTGAGCGTGGTGGTGGTCGATTTGAGGAGAGAGGAACAACAATCGGATTCCGACGATAGCAGCCATAATTAA 1290 0.5419 MAGICCGVVGEGETPTPIEPGRPSRRRRLDLLPLKYIADMAVLHPETELKRPKLDLCTTTPTQPRDCVNAVENCESSGVKNGEEHNKEEPKEDEARSTVSLLNSTATEESGNEDANECPKFGVTSVCGRRRDMEDAVSVRPSFCQELGQNQKELHYFGVFDGHGCSHVATICKDRLHEIVKEEMSGSREDLEWKSVMEQSFARMDEEVQNWSQSNQSSTCRCELQTPHCDAVGSTAVVAVVTPDKIVVSNCGDSRAVLCRNGVTIPLSSDHKPDRPDELLRVQAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTDEDECLILASDGLWDVVSNDTACGVVRMCLKVQKPPSPPGSPGSDMAVCSAADGSDKACSDASILLTKLALARHSTDNVSVVVVDLRREEQQSDSDDSSHN 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0984 429 ProSiteProfiles PPM-type phosphatase domain profile. 120 414 IPR001932 -
Dere05g0984 429 MobiDBLite consensus disorder prediction 78 96 - -
Dere05g0984 429 FunFam Protein phosphatase 2C 37 115 421 - -
Dere05g0984 429 ProSitePatterns PPM-type phosphatase domain signature. 156 164 IPR000222 GO:0043169
Dere05g0984 429 SMART PP2C_4 108 412 IPR001932 -
Dere05g0984 429 SUPERFAMILY PP2C-like 118 415 IPR036457 -
Dere05g0984 429 PANTHER PROTEIN PHOSPHATASE 98 414 IPR015655 GO:0004722|GO:0006470
Dere05g0984 429 MobiDBLite consensus disorder prediction 78 99 - -
Dere05g0984 429 Gene3D - 115 423 IPR036457 -
Dere05g0984 429 CDD PP2Cc 120 414 IPR001932 -
Dere05g0984 429 Pfam Protein phosphatase 2C 121 386 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0984 Dere-ChrDere05 15944028 15945767 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0984 119 420 PP2C-type Phosphatase Gene Family AT1G07430 63.043 5.58e-143 413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g0984 05 15944028 15945767 Dere05g0984 05 15944028 15945767 CCT
Dere05g0984 05 15944028 15945767 Dere05g0984 05 15944028 15945767 ECH