Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0968 ATGGTTGACCTTGCTTCCTACGAGAAACGACTGTTCCTGAAGGAACTTTTTCGCGCTCCCTTTTCCTTCTCTCGGATCTCCCATTTCGCCAAATCTATACATAAGGTTTCCGCCGTCGTTATGGCTCCTTCAGAAGTCAATCATCTTTCTCACCCCTGCATATATGGGGATTTTGTTTCCTCATACTCAGAGAGGAAGTCTGGCTTTATGAAATGGTTTAGTAAGCTTTTCAAAGGTGGGTCCAATCGAGGAAGGGGAGGTCGTCATCTCCAGCAGCCTACGGAGGAAAATATGGTTTGGCGTAATCCAGCTAGATCGTTGGATGACCGTTCTAGATCTCAGAAGGAGAAAGAGGATCTGGATCATGCAATTGCACTTTCTTTAGCTGAAGATTTGAAGAGACCAAATGGGATTAAACATTACTTTTCATTAGCTCGTCAACGATATAGATATCGCACAGACACTGATGAAGATTATGCAAGGGAACTTCAGGATAGGCTGAACTCATCTGCATATCCTCCATATAACCCTACACCATTTTATCCCGGGGCTGGGAAGGAACAGAGGCTTTCGGTACCTTGTACAACTAATCATGTGCATTTGCTATTAAAATGCAGAATATGTGGTGGGTGCAAGCAGGAGATAGTCTATGGGAATTGTTTGAAATGCAATAATACTTTTTACCATCCAGGCTGCTTTCGCTGTCACTCTTGTGGTTACCCCATTACTGAGCATGAGTTTTCTTTGTCAGGGAAGCATCCATATCACAAGTCTTGTTTCAAAGAATTGACCCACCCAAAATGCGAAGTTTGCCACCAGTTTATTCCTATAAATGCTGCTGGTTTGATTGAGTATAGGTGTCACCCATTTTGGTCCCAAAAATATTGTCCCTCTCATGAATATGATAATACAGATCGCTGCTGTAGTTGTGAAAGATTGGAGTCTAGGAATGCAAAATACTATAGTTTGGAAGATGGAAGGAGCTTATGCTTAGAGTGCATGGAATCTGCTATAATGGACACTGGTGATTGTCAACCTCTTTATCATGCTATCAGAGATTATTATGAAGGAATGAATATGAGAATAGATCAACAAATTCCTATGCTTCTGGTTGAGAGGCAAGCACTCAATGAAGCTATTGTCGGGGAGAAGAATGGTTACCATCACTTGCCAGAGACAAGGGGCTTATGCCTTTCAGAAGAGCAGACTGTCACCAGTATACATCGAAGACCAAGAATTGGAGGCCACCGGTTAATTGGGATGAGAACTCAACCTCAAAAGCTGACTAGAAAATCTGAAGTTACAGCCATTCTTGTTCTCTATGGTCTTCCAAGGTTACTCACAGGTGCTATCCTTGCCCACGAGTTGATGCATGGTTGGTTACGCCTTAAAGGTTACCGCAATCTTAATCCTGAAGTTGAGGAAGGTATCTGTCAGGTTCTATCTTACATGTGGCTTGAGTCGGAAGTGATGCCTAGCTTCAAAGGCATGCCTTCAACTTCAGCAGCTTCTTCCTCCAGCTCCTCCTCCTCATCGAAGAAAGGGGCCAAGTCTGAAGTTGAAAATAAATTGGGTCAGTTTTTCATGAATCAGATCGCCAATGATTCTTCTCCAGCTTATGGGGGTGGCTTTAGGGCTGCTAATGAAGCTGTGAACAAATATGGCTTACGTTGTACTCTCGAGCATATTCGTTTGACTGGTAGTTTCCCACTGTAA 1716 0.4307 MVDLASYEKRLFLKELFRAPFSFSRISHFAKSIHKVSAVVMAPSEVNHLSHPCIYGDFVSSYSERKSGFMKWFSKLFKGGSNRGRGGRHLQQPTEENMVWRNPARSLDDRSRSQKEKEDLDHAIALSLAEDLKRPNGIKHYFSLARQRYRYRTDTDEDYARELQDRLNSSAYPPYNPTPFYPGAGKEQRLSVPCTTNHVHLLLKCRICGGCKQEIVYGNCLKCNNTFYHPGCFRCHSCGYPITEHEFSLSGKHPYHKSCFKELTHPKCEVCHQFIPINAAGLIEYRCHPFWSQKYCPSHEYDNTDRCCSCERLESRNAKYYSLEDGRSLCLECMESAIMDTGDCQPLYHAIRDYYEGMNMRIDQQIPMLLVERQALNEAIVGEKNGYHHLPETRGLCLSEEQTVTSIHRRPRIGGHRLIGMRTQPQKLTRKSEVTAILVLYGLPRLLTGAILAHELMHGWLRLKGYRNLNPEVEEGICQVLSYMWLESEVMPSFKGMPSTSAASSSSSSSSSKKGAKSEVENKLGQFFMNQIANDSSPAYGGGFRAANEAVNKYGLRCTLEHIRLTGSFPL 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0968 571 MobiDBLite consensus disorder prediction 496 515 - -
Dere05g0968 571 CDD LIM_DA1 208 260 - -
Dere05g0968 571 ProSiteProfiles LIM domain profile. 206 266 IPR001781 -
Dere05g0968 571 MobiDBLite consensus disorder prediction 496 516 - -
Dere05g0968 571 Pfam LIM domain 208 261 IPR001781 -
Dere05g0968 571 PANTHER PROTEIN DA1-RELATED 2 72 570 IPR045218 -
Dere05g0968 571 Gene3D Cysteine Rich Protein 204 267 - -
Dere05g0968 571 SMART lim_4 207 259 IPR001781 -
Dere05g0968 571 Pfam Protein DA1 357 566 IPR022087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0968 Dere-ChrDere05 15739652 15745232 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dere05g0968 DA1-like 1.5e-99 CL0126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g0968 05 15739652 15745232 Dere05g0968 05 15739652 15745232 CCT
Dere05g0968 05 15739652 15745232 Dere05g0968 05 15739652 15745232 ECH