Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0961 ATGCACCCAACATCACTGGCGGATTCAATAGCTCCATATCCATATATGTATGATAGATATCAAATGGCTCTTCTGACTTACATCGAAAATTCTTTGGATGAAGCGTTGGTAAAGGGAAAGATAGTTCTTTGTGAGGGGTTTTCATCTGATGAAGCAGGCCTTGTGTCTGGGGCAGCTGGTGTTCTCGTTCGAACCCTTTCTCCAAAAGGTGTGGCATCTGTCTTTGCTTTTCCTGCCGCTCGTCTCAGTCAACAAGATGGCACTCTCGTATACTCTTACATTAGTTCAACAAGTAATCCAACAGTTACTATATTTAAGAGTAAGGAATCCAAAGATTCTTTGTCCCCTTATGTGGCTTCCTTCTCATCAAGGGGTCCAAATCCAATAACCCCCAACATCCTCAAGCCTGATATAACTGCCCCAGGAGTAGCCATTCTTGCTGCATGGTCTCCCAATTCCCCTATTTCAGACGTTAATGGAGACAACAGAGAATCAAACTTTAATATAATATCTGGCACTTCTATGGCATGCCCTCATGTTACAGCAGCCGCTGCCTACGTCAAATCGTTTCATCCCACGTGGTCCCCAGCAGCAATCAAGTCTGCCCTAATGACCACTGCTACTCCCATGAGTTCTGCACTTAACCCGGAAGCTGAATTTGCTTATGGAGCTGGTCAAATTAATCCCACTAAGGCCGTGAGTCCTGGTTTGATCTACGATATCGGTGAATTAGATTATGTGAGGTTCTTGTGTGGACAAGGTTATGATACCAAAAAGCTACGAAGCCTGACAGGTGATGACAGCAGCTGTAACCAAACTAGGAATGAAACTGTGTGGGATTTCAACCTCCCATCCTTCGCTCTTAACGTCTCAGGATCTTTTAGCAGTGAGTTTCATAGAACTGTCACAAATGTTGGAACAGCTACATCAGTATATAAAGCCAGAGTGATTGCTCCTCCATCTATGCTAAATATTCAAGTGAAACCGGATGTTTTGTCATTCTCATCTGTGGGGGAGAAGCAATCGTTCACGATTACGATTGAAGGAAGAATAGAAGTAGAAATTGCGTCAGCTTCTTTAATTTGGGATGATGGCACTGTCCAAGTGAGGAGCCCGATTGTGGTGTATAATACTTCGTGA 1140 0.4377 MHPTSLADSIAPYPYMYDRYQMALLTYIENSLDEALVKGKIVLCEGFSSDEAGLVSGAAGVLVRTLSPKGVASVFAFPAARLSQQDGTLVYSYISSTSNPTVTIFKSKESKDSLSPYVASFSSRGPNPITPNILKPDITAPGVAILAAWSPNSPISDVNGDNRESNFNIISGTSMACPHVTAAAAYVKSFHPTWSPAAIKSALMTTATPMSSALNPEAEFAYGAGQINPTKAVSPGLIYDIGELDYVRFLCGQGYDTKKLRSLTGDDSSCNQTRNETVWDFNLPSFALNVSGSFSSEFHRTVTNVGTATSVYKARVIAPPSMLNIQVKPDVLSFSSVGEKQSFTITIEGRIEVEIASASLIWDDGTVQVRSPIVVYNTS 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0961 379 Gene3D Peptidase S8/S53 domain 112 246 IPR036852 GO:0004252|GO:0006508
Dere05g0961 379 CDD PA_subtilisin_like 29 104 - -
Dere05g0961 379 Gene3D - 29 111 - -
Dere05g0961 379 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 375 IPR045051 -
Dere05g0961 379 Pfam Subtilase family 97 225 IPR000209 GO:0006508|GO:0008236
Dere05g0961 379 ProSitePatterns Serine proteases, subtilase family, serine active site. 172 182 IPR023828 -
Dere05g0961 379 ProSiteProfiles Serine proteases, subtilase domain profile. 1 233 - -
Dere05g0961 379 Gene3D - 250 378 - -
Dere05g0961 379 Pfam Fibronectin type-III domain 280 375 IPR041469 -
Dere05g0961 379 SUPERFAMILY Subtilisin-like 115 261 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0961 Dere-ChrDere05 15639213 15640732 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0961 32 376 Subtilisin-like Serine Gene Family AT3G46850 48.732 1.42e-101 315