Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0958 ATGATATTATATCACCAAGGGATTCGGATGGCCATGGGACTCACTGTGCGTCCACAGTTGCTGGAAACTTGGTTAGCTCTGCAAGTCTCTATGGATTTGGCTCAGGCACTTCCAGAGGAGGAGTTCCATCTGCTCGTATTGCTGTGTACAAGCCCTGTTGGTCATCAGGTTGTGAAGACGCTGACATTCTCGCCGCATTTGACGAAGCAATTTCTGATGGAGTTGACATACTTTCTGTATCACTTGGCGCGAAAATTGTGGGTACACCCCAACTATTTTGAGGACACATTTGCAATAGGAGCTGTCCATGCATTGAAGAAAGGCATTCTAACGTCAATAGCTGCCAACAACTTGGGTCCAGAGCTTTTCACCATGACGAGTTATGCTCCCTGGTCGCTTTCTGTGGCTGCTTCCACTACTGGTAGAAAGTTCTCCACCCAGGTGCAGTTGGGGAATGGAATGGTCTTTCAGGGAGTTTCAATAAATACATTTGACCTTGAGAGTAAAACATATCCTTTGATTTACGCTGGAGATGCACCCAACATCACTGGCGGATTCAATAGTTCCATATCCATGACTTGCATCCATAACTCTTTGGATGAAGCGTTGGTAAAGGGAAAGATAGTTCTTTGTGAGGGGTTTTCAACTAAGGATGCAGGCCTTGTGTCTGGGGCTGCTGGTGTTCTCGTTCGAACCCCTTCACCAAAAGATGTGGCATCTGTCTTTGCTTTTCCTGCCGCTTTTCTCAGTCAACAAGATGGCACTCTCGTGTACTCTTACATTAGTTCAACAAGTAATCCAACAGCTACTATATATAAGAGTAAGGAATCCAAAGATTCTTTGTCCCCTTATGTGGCTTCCTTCTCATCAAGGGGTCCAGATCCAATAACCCCCAACATCCTCAAGCCTGATATAACTGCCCCAGGAGTATCCGTTCTGGCTGCATGGTCTCCTATTTCCCCCGTTTCATACGTTAAAGGAGACAATAGAGAATCAGACTATAATATAATATCTGGCACTTCCACGGCATGCCCTCGTGCTACAGCAGCTGCTGCCTACGTCAAATCGTTTCATCCCACGTGGTCCCCAGCAGCAATCAAGTCTGCCCTAATGACCACCGCTATTCCCATGAGTTCTGCACTTAACCCGGAAGCTGAATTTGCTTATGGAGCTGGTCAAATTAGTCCCATTAAGGCTGTGAGTCCTGGTTTGGTCTACGATATCAGTGAATTAGATTATGTGAGGTTCTTGTGCGGACAAGGTTACGACACCAAAAAGCTACGAAGCCTTGCACATGATAACACCGGCTGTAACCAAACTCAGAATGAAACTGTGTGGTACCTCAATCTCCCATCTTTCGCTCTATATAGAAACGTCTCAGGTTTTTTTAGCAGTGAGTTTCATAGAACTGTCACAAATGTTGGAGCAGCTAAATCCGTGTATAAAGCTAGAGTGATTGCTCCTCCATCTCTACTAAATATTCAAGTGAAACCAGAAGTTTTGTCATTCTCATCTGTGGGTGAGAAGAAGTCGTTCACGCTTACGATTGAAGGAAGTATAAATGTGGGTATTGTGTCAGCTTCTTTGATTGGGGATGATGGCACTGTCCAAGTGAGGAGCCCCATTGTGGTGTATAATGAGTAA 1644 0.4519 MILYHQGIRMAMGLTVRPQLLETWLALQVSMDLAQALPEEEFHLLVLLCTSPVGHQVVKTLTFSPHLTKQFLMELTYFLYHLARKLWVHPNYFEDTFAIGAVHALKKGILTSIAANNLGPELFTMTSYAPWSLSVAASTTGRKFSTQVQLGNGMVFQGVSINTFDLESKTYPLIYAGDAPNITGGFNSSISMTCIHNSLDEALVKGKIVLCEGFSTKDAGLVSGAAGVLVRTPSPKDVASVFAFPAAFLSQQDGTLVYSYISSTSNPTATIYKSKESKDSLSPYVASFSSRGPDPITPNILKPDITAPGVSVLAAWSPISPVSYVKGDNRESDYNIISGTSTACPRATAAAAYVKSFHPTWSPAAIKSALMTTAIPMSSALNPEAEFAYGAGQISPIKAVSPGLVYDISELDYVRFLCGQGYDTKKLRSLAHDNTGCNQTQNETVWYLNLPSFALYRNVSGFFSSEFHRTVTNVGAAKSVYKARVIAPPSLLNIQVKPEVLSFSSVGEKKSFTLTIEGSINVGIVSASLIGDDGTVQVRSPIVVYNE 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0958 547 CDD PA_subtilisin_like 148 271 - -
Dere05g0958 547 Gene3D - 417 546 - -
Dere05g0958 547 ProSiteProfiles Serine proteases, subtilase domain profile. 1 400 - -
Dere05g0958 547 Gene3D Peptidase S8/S53 domain 91 413 IPR036852 GO:0004252|GO:0006508
Dere05g0958 547 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 90 544 IPR045051 -
Dere05g0958 547 ProSitePatterns Serine proteases, subtilase family, serine active site. 339 349 IPR023828 -
Dere05g0958 547 Pfam Subtilase family 104 392 IPR000209 GO:0006508|GO:0008236
Dere05g0958 547 Pfam Fibronectin type-III domain 448 544 IPR041469 -
Dere05g0958 547 Gene3D - 141 278 - -
Dere05g0958 547 SUPERFAMILY Subtilisin-like 91 404 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0958 Dere-ChrDere05 15591050 15593213 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0958 92 545 Subtilisin-like Serine Gene Family AT3G46850 47.609 1.89e-128 390