Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0943 ATGGTGAAGGGACGCCAAGGAGAGCGTGTCAGACTTTATGTCAGAGGTTCGATCCTTGGATATAAGAGGTCCAAGTCAAACCAATACCCAAATACATCACTTATCCAGATAGAGGGAGTAAACTCCAAGGAAGAGGTTGCATGGTACTGTGGCAAGCGCATGGCATACATTTACAAGGCCAAGGTGAAGAAGAATGGAAGCCACTATCGCTGCATTTGGGGGAAGGTGATCAGGCCTCATGGTAACAGCGGTATTGTCCGTGCCAAGTTCAAGTCAAATTTGCCACCCAGATCAATGGGAGCAAGGGTTAGAGTCTTCATGTATCCAAGCAACATTTAA 339 0.4661 MVKGRQGERVRLYVRGSILGYKRSKSNQYPNTSLIQIEGVNSKEEVAWYCGKRMAYIYKAKVKKNGSHYRCIWGKVIRPHGNSGIVRAKFKSNLPPRSMGARVRVFMYPSNI 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0943 112 Pfam Ribosomal protein L35Ae 12 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Dere05g0943 112 SUPERFAMILY Translation proteins 12 106 IPR009000 -
Dere05g0943 112 Gene3D translation elongation factor selb, chain A, domain 4 6 112 IPR038661 -
Dere05g0943 112 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 14 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Dere05g0943 112 PANTHER 60S RIBOSOMAL PROTEIN L35A 2 112 IPR001780 GO:0003735|GO:0005840|GO:0006412
Dere05g0943 112 FunFam 60S ribosomal protein L35a 7 112 - -
Dere05g0943 112 ProSitePatterns Ribosomal protein L35Ae signature. 74 95 IPR018266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0943 Dere-ChrDere05 15400952 15402326 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0943 1 112 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 88.393 2.36e-73 211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g0943 05 15400952 15402326 Dere05g0943 05 15400952 15402326 ECH