Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0929 ATGCCTTCTTCTTCTTCAACCATCACTGTACTCTCTAAATGCATTGTGTACCCTGACCAGATATCGACCCTCGCAGACCTCAAGCTCTCCATCTCCGACCTCGCCATGCTCTCTTGCCACTACATCCAAAAAGGTTGCCTCTTCCCTCTCCCTTCTCTCCCCTTCCACGATCTCCTTCCTCTCCTCAAGACCTCTCTCTCTCGCACTCTCTCTCACTTCCCTCCTCTAGCCGGCCGCCTCACCACCGATTCCCACGGCTACGTTTACATCACCTGCAACGACGCCGGCGTCGATTTCCTCCACGCCAATGCAACTGAATACTTCATCGGCGACCTCTTGTCCCCACCCGACGTCCCCGATTCCTTCAAGCATTTCTTCACCTTCGACCAAAAGGTCAGCTACACCGGCCACTTCAGCCCACTTTTGGCCGTTCAGGTCACTGAGCTCGCAGACGGCGTCTTCATCGGCTGTGCCATGAACCACGCCGTCGCAGACGGCACGACGTTCTGGAATTTCTTCAATACTTTCGCTGAAGTGTGTAGAGGAGCCGATAAAATCTCCAACGTACCGGACTTCCGCCGGGAGTCGGTTCTGATTTCCAAAGCGGTGCTCCGGTTTCCGGAAGGCGGCCCCACTGTCACTTTCAACCCTGAAGAGCCGTTGAGGGAAAGAATTTTCAGCTTCTGCCGCGAAGCCATTCAGAAGCTGAAAGACACTGTAAACAGCCAGAAACTCACGGAGAACGAGGAGGTTAACGCCATGGAGTTCATAGGTAAGCAAAGCAACGATCACTACCACAAAAATAATGGCAAGGTGGACATCTCGTCGTTTCAGTCACTCTGCGCGCTGCTCTGGCGAGGTGTGACGCGCGCGAAGAAGTTGCATCCGTCGAAAATGACAACGTTTAAGATGGCAGTGAACTGTCGCGTGAGGTTAGAGCCCCAACTGAATCCCTACTATTTCGGAAACGCGATTCAGAGCATACCCACGTATGCCAGCGCGGGGGAAGTGGTGTCTAGGGATCTACGGTGGTGCGCGGAGGAGCTGAACAAGAGCGTGAGGGCGCACGGGGACGCTACGGTGAGGCGGCTCGTAGAGGATTGGGAGAGAAACCCGAGGTGCTTCCCGCTGGGGAATTCCGAAGGCACAACAATAACGATGGGGAGCTCGCCGAGATTCCCGATGTACGAGAACGATATGGGGTGGGGGAGGCCGGTGGCAGTTCGGAGCGGTCGAGCGAACAAATTTGACGGTAAGATATCGGCGTTTCCGGGGAGAGAAGGAGGTGGGAGCGTGGACTTGGAGGTGATTCTGGCGCCGGAGACGATGGCGAGGCTGGAATCGGACCCGGAGTTCATGCTTTACGCATCGAGTTCTTCGTGCATTTGTTGGGGCCCTTGA 1401 0.5546 MPSSSSTITVLSKCIVYPDQISTLADLKLSISDLAMLSCHYIQKGCLFPLPSLPFHDLLPLLKTSLSRTLSHFPPLAGRLTTDSHGYVYITCNDAGVDFLHANATEYFIGDLLSPPDVPDSFKHFFTFDQKVSYTGHFSPLLAVQVTELADGVFIGCAMNHAVADGTTFWNFFNTFAEVCRGADKISNVPDFRRESVLISKAVLRFPEGGPTVTFNPEEPLRERIFSFCREAIQKLKDTVNSQKLTENEEVNAMEFIGKQSNDHYHKNNGKVDISSFQSLCALLWRGVTRAKKLHPSKMTTFKMAVNCRVRLEPQLNPYYFGNAIQSIPTYASAGEVVSRDLRWCAEELNKSVRAHGDATVRRLVEDWERNPRCFPLGNSEGTTITMGSSPRFPMYENDMGWGRPVAVRSGRANKFDGKISAFPGREGGGSVDLEVILAPETMARLESDPEFMLYASSSSCICWGP 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0929 466 SUPERFAMILY CoA-dependent acyltransferases 60 182 - -
Dere05g0929 466 Gene3D - 8 205 IPR023213 -
Dere05g0929 466 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 10 453 - -
Dere05g0929 466 Pfam Transferase family 7 453 - -
Dere05g0929 466 Gene3D - 208 448 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0929 Dere-ChrDere05 15138981 15140381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0929 61 447 Monolignol Biosynthesis Gene Families AT5G48930 28.856 1.12e-34 132