Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0907 ATGAGCCCAGAATTCTATTTTGTTGCATATATATTTCTTTCTTCTGCTCCACTTCCACCTGTCCCCTCCAATCTCTCTGCCATGGCCGCCCCTGCCACGTCCGCCGCCACGTCATGCTTCTTCGGTGCTCGTCTCAGCAACAACCTCGCCTCTGACTCCGGCAGATTCCACGCCCTTCTCGGATTCCGCATCAAGAAGAAGGCGGCACCGCCTCCGCCCAAGAAAGCGGCGCCGAAACCAAAGAGTGACCGGCTCGTGTGGTTCCCGGGTGCGCAACCACCGGAATGGCTCGACGGAACCATGGTGGGAGACCGTGGGTTCGACCCATTTGGGTTAGGGAAACCGGCTGAGTACTTGCAGTTCGATTTGGACTCGTTGGACCAGAATCTGGCGAAGAATGAGGCTGGAGAAGTGATCGGAACCAGAGTGGAGGCCACGGAGGTTAAACCGACGCCGTTCCAGCCGTACACGGAGGTGTTTGGGTTGCAGAGGTTCCGTGAGTGCGAGCTGATTCATGGACGGTGGGCAATGCTGGGAGCACTTGGTGCCTTGGCCGTTGAGGCTCTCACTGGGGTCGCATGGCAAGACGCAGGAAAGGTAGAGCTGGTGGAAGGTTCATCCTACTTGGGGCTTCCTCTTCCATTCTCACTGACCACATTGATCTGGATTGAGGTGATATTGATAGGCTACATTGAATTCCAAAGAAATGCAGAACTCGATCCAGAAAAAAGGTTATACCCAGGCGGCAAGTTCTTCGATCCCCTTGGCTTGGCCAACAACCCTGAAGAGAAGGCCAGACTTCAACTGGCAGAGATCAAGCATTCCAGGTTAGCTATGGTGGTTTTCCTCATCTTTGCAATTCAAGCTGCTGTTACAGGAAAAGGCCCCATCGCTTTTATTGCTACATTTAACAAGTGA 918 0.537 MSPEFYFVAYIFLSSAPLPPVPSNLSAMAAPATSAATSCFFGARLSNNLASDSGRFHALLGFRIKKKAAPPPPKKAAPKPKSDRLVWFPGAQPPEWLDGTMVGDRGFDPFGLGKPAEYLQFDLDSLDQNLAKNEAGEVIGTRVEATEVKPTPFQPYTEVFGLQRFRECELIHGRWAMLGALGALAVEALTGVAWQDAGKVELVEGSSYLGLPLPFSLTTLIWIEVILIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANNPEEKARLQLAEIKHSRLAMVVFLIFAIQAAVTGKGPIAFIATFNK 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0907 305 SUPERFAMILY Chlorophyll a-b binding protein 81 302 - -
Dere05g0907 305 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 42 301 IPR001344 GO:0009765|GO:0016020
Dere05g0907 305 Pfam Chlorophyll A-B binding protein 93 289 IPR022796 -
Dere05g0907 305 Gene3D Chlorophyll a/b binding protein domain 86 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0907 Dere-ChrDere05 14830449 14834075 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0907 41 302 Chloroplast and Mitochondria Gene Families AT3G08940 73.664 1.70e-137 389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g0907 05 14830449 14834075 Dere05g0907 05 14830449 14834075 ECH