Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0900 ATGGCGATTAAAGCTAATAGATCGCTGGTTTCGGTATGTCTTCTGTGGATTTTCATTCTTTGCGTAACTATAGCATTCTTTCAGCTTAAATTTATCGAGAACGGAAGAGACCATTCATCTCACAACAAGAGCATCGAAACTGCGCACCATCGGATCGATGGGAAACTTGCGGGTCGCATAGTCATGGGACTTTTCGGGGCAGTGGTTCCAAAAACCGTAGAAAACTTTCGAGCACTTTGTACTGGAGAGAAAGGGGTGGGAAAAAGCGGGAAGCCTCTTCATTACAAAGGTAGCACATTCCATAGGATAATACCCAGCTTTATGGTCCAGGGGGGTGATTTCACCCGTGGTGATGGACGAGGGGGAGAATCAATCTATGGTGCTAAGTTTGCTGATGAAAACTTCAAAGTTAAGCATTCTGGGCCAGGATACTTGTCGATGGCAAATGCTGGAACGGACACCAATGGCTCGCAATTTTTCATAACAACAGAAAAAACCAGCTGGCTGGATGGACGCCATGTTGTATTTGGCAAGGTGCTTTCAGGGATGGACGTTGTCTACAAGATTGAAGCTGAAGGAAGTGGCAATGGCGAGCCCAAAGGCAGGGTTGTTATAACGGACAGTGGGGAATTGACTTCATGA 642 0.4611 MAIKANRSLVSVCLLWIFILCVTIAFFQLKFIENGRDHSSHNKSIETAHHRIDGKLAGRIVMGLFGAVVPKTVENFRALCTGEKGVGKSGKPLHYKGSTFHRIIPSFMVQGGDFTRGDGRGGESIYGAKFADENFKVKHSGPGYLSMANAGTDTNGSQFFITTEKTSWLDGRHVVFGKVLSGMDVVYKIEAEGSGNGEPKGRVVITDSGELTS 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0900 213 Gene3D - 37 213 IPR029000 -
Dere05g0900 213 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 51 211 - -
Dere05g0900 213 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 57 208 IPR002130 GO:0000413|GO:0003755
Dere05g0900 213 SUPERFAMILY Cyclophilin-like 49 211 IPR029000 -
Dere05g0900 213 MobiDBLite consensus disorder prediction 193 213 - -
Dere05g0900 213 CDD cyclophilin_ABH_like 51 209 - -
Dere05g0900 213 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 143 158 IPR002130 GO:0000413|GO:0003755
Dere05g0900 213 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 171 186 IPR002130 GO:0000413|GO:0003755
Dere05g0900 213 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 100 112 IPR002130 GO:0000413|GO:0003755
Dere05g0900 213 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 158 170 IPR002130 GO:0000413|GO:0003755
Dere05g0900 213 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 79 IPR002130 GO:0000413|GO:0003755
Dere05g0900 213 FunFam Peptidyl-prolyl cis-trans isomerase 43 212 - -
Dere05g0900 213 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 95 112 IPR020892 GO:0003755|GO:0006457
Dere05g0900 213 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 47 210 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0900 Dere-ChrDere05 14743122 14745366 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0900 58 190 U-box Gene Family AT5G67530 44.776 2.38e-26 103
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g0900 05 14743122 14745366 Dere05g0900 05 14743122 14745366 ECH