Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0896 ATGACGAAATCACTCTCCTCCTTCACCGTCGTCTCCGTCAAGGTCAGCCTCGTCGTCGCCGTCGCCGTCGCGACAATCTTGTCTGTAATCCCCTTAACCCATGCTCTGGGCTCCGGCGCCACCCTCGCCATCGCCGACGACGCCAGTACCGTCTGTGGCATCGTGGCAGGGGAACCGACGCAGCGCATTGAATGCTACCATCGCGGGCAGATCGCTCCAGTTGCGCCCAACGTTTCGTTTACGTCCATTTCCGGCGGGAGGAGTTACTTCTGCGGCCTCAGGTCCGGTAACTACAGTTTGCTCTGCTGGGACACTGTCTCCTCCAACGTTTCCTTTGAAAGCAAGAGGCTTTACTTCAATGATACTGTGCTATTGGAGAATCTGGCAGTTGGGGATGCCCAAGTGTGCACGACCGTCGTGGGGTCCGGCACCGTGGAGTGCTGGAGAACCAGTGGCACGTTCCCAAGGTCGGATCAATTTGCGTCGATATCATCTGGGTCTGGCTTTTCTTGCGGGATTTTGAAGAATACTTCTCTGGTTCGGTGTTGGGGAATGAGCTCCATTTCGAATCAAATACAGACCGAGTTCGGAAACATGCCAATGTTGAGCCTTGTAGCCGGCGATTCGCATGTTTGTGGGTTGAATTTAACAGGGTTTTTGGTATGTCGAGGAAGTAACACTTATGGGCAGCTCGATGTTCCCCAAGGAGGATCTCTGGTTTATTCTGGGTTGGCTCTCGGAGCTGAACATAGCTGCGCGATTAGAAGATGGAATGGTTCGGTTGTTTGTTGGGGAGGCAGAGGGCAATTCTCGGTGAATCTTATAGAAGGAGTTTCTTTTGAGTTAATTGTTTCTGGGTCGAATTTTACTTGTGGATTAACGACAAGCAATTTTTCAGTGATGTGTTGGGGACCTGGTTGGACTAATAGTTCCAGTTTCAATTCTAATCCAAGGTTAGAGCTTCCTTTACCTCGTATTCTTCCAGGGCCTTGTGTTCAATCTTCTTGTAGTGAGTGTGGTATATATCCTCAATCTCAAACTCTATGCTCTGGTTCTGGTAACATTTGCAAGCCTTGTTTGCCTAACATTTCAGCCTCGTCGCCGCCACCTTCTGTTACTCCTCCGTCACCATCGCTTTCTCCACCGTCGTCTCGATCAAAGACATTGACAAGGGGATTATTGGCATTCGCCATTGTTGGATCCGTCGGAGCATTTGCCGGTATATGCACTATAATTTATTGTTTGTGGACTGGAGTTTGTTTTGGTAACAAGAAAGTTTACAATTCTGTGCAACCCACTATCACTAGAGCAGGAAGTTCCAATAATGGTGGTGCTGTAATTTCAAACAATAGCCCACCTTCAAGATCATCTACCATTAAACGTCAGGGCTCGAGAATAATGAGGCGCCAGAGGAGCGGAACCTCATCCACTAAACACCCTGACAGGGCAGAGGAGTTCACTCTAGCCGAGCTTGTGGCAGCCACCGATAATTTTTCACTTGAGAACAAGATCGGTGCTGGTAGCTTTGGCGTTGTGTACAGAGGCAAACTTGCCGATGGTCGCGAGGTGGCGATCAAGAGGGGCGAAACTGGTTCAAAGATGAAGAAGTTCCAAGAGAAAGAGAGTGCATTTGAGTCAGAACTTGCATTCTTGTCCCGTTTACACCACAAACACTTGGTCAGGCTAGTTGGTTTCTGTGAAGAAAAGGATGAGAGGCTCTTGGTGTATGAATACATGAAGAATGGAGCATTATATGATCATTTGCATGACAAGAACAATGTGGAGAGGGGTAGTAGTTTCTTGAATTCATGGAAAATGAGGATCAAAATCGCGCTAGATGCTTCAAGAGGGATTGAATATCTCCATAACTATGCAGTCCCACCCATAATTCATAGAGATATCAAGTCTTCCAACATTCTTCTTGATGCAAATTGGACAGCAAGAGTGTCTGATTTTGGATTGTCATTGATGGGTCCAGACTCTGACCATGATTACCGGCCAACAAAGGCAGCAGGCACGGTTGGATACATTGATCCTGAGTACTATGGTCTGAATGTTTTGACAGCAAAGAGTGATGTCTATGGGCTTGGAATAGTACTGCTAGAACTCTTAACAGGAAAGAGAGCTATATTCAAAAATGGTGAAAATGGAGGTACCCCCGTGAGTGTTGTGGACTTTGCAGTTCCTGCTATAATGGCTGGAGAATTGGTGAAGATTCTGGACCCAAGGGTCGGACCACCAGAGTTGAACGAAGCAGAGGCGGTGGAGCTAGTGGCGTATATCGCTATGCACTGCGTGAATTTGGAAGGGAAAGACAGACCAACAATGACTGACATTGTGGCCAATCTGGAGAGGGCTTTGGCTCTTTGTGATAGTAGTCATGGCAGCATCTCTAGTGGTACAATCTCTGTTGTTTCTGAATGA 2424 0.4761 MTKSLSSFTVVSVKVSLVVAVAVATILSVIPLTHALGSGATLAIADDASTVCGIVAGEPTQRIECYHRGQIAPVAPNVSFTSISGGRSYFCGLRSGNYSLLCWDTVSSNVSFESKRLYFNDTVLLENLAVGDAQVCTTVVGSGTVECWRTSGTFPRSDQFASISSGSGFSCGILKNTSLVRCWGMSSISNQIQTEFGNMPMLSLVAGDSHVCGLNLTGFLVCRGSNTYGQLDVPQGGSLVYSGLALGAEHSCAIRRWNGSVVCWGGRGQFSVNLIEGVSFELIVSGSNFTCGLTTSNFSVMCWGPGWTNSSSFNSNPRLELPLPRILPGPCVQSSCSECGIYPQSQTLCSGSGNICKPCLPNISASSPPPSVTPPSPSLSPPSSRSKTLTRGLLAFAIVGSVGAFAGICTIIYCLWTGVCFGNKKVYNSVQPTITRAGSSNNGGAVISNNSPPSRSSTIKRQGSRIMRRQRSGTSSTKHPDRAEEFTLAELVAATDNFSLENKIGAGSFGVVYRGKLADGREVAIKRGETGSKMKKFQEKESAFESELAFLSRLHHKHLVRLVGFCEEKDERLLVYEYMKNGALYDHLHDKNNVERGSSFLNSWKMRIKIALDASRGIEYLHNYAVPPIIHRDIKSSNILLDANWTARVSDFGLSLMGPDSDHDYRPTKAAGTVGYIDPEYYGLNVLTAKSDVYGLGIVLLELLTGKRAIFKNGENGGTPVSVVDFAVPAIMAGELVKILDPRVGPPELNEAEAVELVAYIAMHCVNLEGKDRPTMTDIVANLERALALCDSSHGSISSGTISVVSE 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0896 807 SMART serkin_6 498 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0896 807 MobiDBLite consensus disorder prediction 438 461 - -
Dere05g0896 807 MobiDBLite consensus disorder prediction 438 481 - -
Dere05g0896 807 FunFam Serine/threonine-protein kinase-like protein CCR4 579 800 - -
Dere05g0896 807 Gene3D Transferase(Phosphotransferase) domain 1 579 796 - -
Dere05g0896 807 ProSitePatterns Protein kinases ATP-binding region signature. 504 526 IPR017441 GO:0005524
Dere05g0896 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Dere05g0896 807 Gene3D Phosphorylase Kinase; domain 1 458 578 - -
Dere05g0896 807 SUPERFAMILY Protein kinase-like (PK-like) 475 783 IPR011009 -
Dere05g0896 807 CDD STKc_IRAK 504 785 - -
Dere05g0896 807 ProSiteProfiles Protein kinase domain profile. 498 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0896 807 Gene3D - 197 321 IPR009091 -
Dere05g0896 807 FunFam serine/threonine-protein kinase-like protein CCR1 467 578 - -
Dere05g0896 807 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 197 793 IPR044815 GO:0004674
Dere05g0896 807 Pfam Protein kinase domain 499 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0896 807 Gene3D - 32 196 IPR009091 -
Dere05g0896 807 SUPERFAMILY RCC1/BLIP-II 158 309 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0896 Dere-ChrDere05 14693321 14695744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0896 5 807 Receptor kinase-like Gene Family AT3G55950 62.530 0.0 921
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Dere05g0896 Pkinase 1e-44 CL0016