Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0894 ATGGCCGTCTCCGACGTCGACGCCGTCCTAGAGTTCTTGAGGAAGAATGGATTTTCAGAGGTAGAGTCTGCCCTCAAACAGGACATCATCGAAAAGGTTGATCTGGGATCCTTTGACTACGAGACATTCTTCTTCCCCATGGTGCCTCCACCGCGGCCGGTCAGGGTACGATCGTTTTCCAGGCCGACGGAGCCGCAGGCAGGCAGAGAGTGCTCGTCGGAAGATGAGTTTGTGAGCTTGGGTTCTTCTACTTCTGATGTTTGTTCTTCAGGTACTTACTCTGCTCAATTCTGTACTCTTGTTGTTTTTGCAGGATTCATCAATCCATATGGAATCCGTTCCTCATCTCAGAATGATTCTGAATCTTCATCTGGGAGGCTATCTCAATTTGGAACGGCAAGAGATTACTATGAATTCGATATACAAAACGAATCCTATTGGTATGACGAGAAAGATGACAACAATTTCATGACTCCAAGCTTTGAAGGGCCAGATTATTTTGCTTGTCAAGCAGAGGACAAGTTCGTAACGACATCAGAAATGAACAATCAACACGAGAATCCTCTGAGTCTTCGTTACACCTCTGAAGGATTTCACTTAGAGGGAAATGGTGATTGTATAGACAAGGCATGCCTTTCTAATGATCTCTTTGAAGGGGGTCAAAGTCTGACTTACTTGGAAGACTATTGTAGCGTGGATAAGAAAGATCGGATCGAAGGAGGATTATTGGAAAAGGAAATTCATCTCAATGGTTCTCTCTCGAAGGTTTTTGGGAAATCTTCTGCTTTTAATTTTGCTTCGGTGAATACTATGAACCAAACATTTGACTACTACACAAATAATGATATCAGTGAGGAGAATAACGGTTCTTATGAGTTGACTATCAATGTTGCTGAAACAAATCTATTGAATGGACTTAACAGCTTCAAAGCTCGAGATGATAGAGAATTAACTGATGAATGCCATGAATCAGATGGTGCTGCAGATGGAGGGGATATTACTGATGATGAACTCCTAAAGTACACTCCTGAGGATGACTATGAAGTTTTTGAGCTAAGAATCATTCATAGAAAAAACAGGACTGGGTTTGAAGAAAACAAGGATCTGCCCATTGTACTAAATACAGTCCTAGCTGGCAGATACTATGTTACACAGTATCTTGGTTCGGCAGCCTTCAGTAAGGTTGTTCAGGCACACGATCTTCAGACAGGAATTGATGTTTGCTTGAAGATTATAAAAAATGACAAAGACTTTTTCGATCAAAGCTTGGATGAAATCAAGCTTCTTAAACTTGTCAATAAGCATGATCCAGCAGATCGATTCCACTTTCTTCGTCTTTATGACTACTTCTATCATCAGGAGCATCTATTTATTGTTACTGAGCTTCTGGGAGCAAACTTATATGAATTTCAGAAATTCAATCAAGAATCTAGTGATGAGGCATATTTTACAATGAGCAGGTTGCAGATGATTACTCATCAGTGTTTGGAGGCATTGCAATACTTGCACAGCTTGGGAGTCATTCACTGTGACCTAAAGCCAGAAAATATACTCATAAAAAATTACAGAAAATGCAAGATAAAGGTTATTGATCTGGGAAGCAGTTGCTTTCAAACAGACAATTTGTGCCTGTATGTACAATCACGATCCTATAGGGCTCCCGAGGTGATGTTGGGCCTCCAATATGATGAAAAGATTGACATATGGTCCCTAGGCTGCATCTTGGCTGAGCTATGCTCCGGTGAAGTGCTCTTTCCAAATGATGCAGTTGTGATGATTCTTGCACGCATGATTGGAATGCTTGGTCCTATTGACCTAGAGATGTTGGTGAGAGCGGAGGAAACACACAAGTACTTCACCAAAGAATTTGATCTTTATTATGTTAATGAGGAGACAAATCAAGTGGAGTACGTAATTCCAGAGGAGTCATCGTTGGAGCAGCACCTGCAGGCTTCTGATACTATGTTCATCGACTTTGTCAGATACTTGCTTAGTATCAACCCTAGAACAAGGCCTACTGCAGCAGAGGCACTAAAGCATCCATGGCTTTCCCATGTTTATAAGTCCAAGTACAAGAATGTTCATTGA 2088 0.4133 MAVSDVDAVLEFLRKNGFSEVESALKQDIIEKVDLGSFDYETFFFPMVPPPRPVRVRSFSRPTEPQAGRECSSEDEFVSLGSSTSDVCSSGTYSAQFCTLVVFAGFINPYGIRSSSQNDSESSSGRLSQFGTARDYYEFDIQNESYWYDEKDDNNFMTPSFEGPDYFACQAEDKFVTTSEMNNQHENPLSLRYTSEGFHLEGNGDCIDKACLSNDLFEGGQSLTYLEDYCSVDKKDRIEGGLLEKEIHLNGSLSKVFGKSSAFNFASVNTMNQTFDYYTNNDISEENNGSYELTINVAETNLLNGLNSFKARDDRELTDECHESDGAADGGDITDDELLKYTPEDDYEVFELRIIHRKNRTGFEENKDLPIVLNTVLAGRYYVTQYLGSAAFSKVVQAHDLQTGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPADRFHFLRLYDYFYHQEHLFIVTELLGANLYEFQKFNQESSDEAYFTMSRLQMITHQCLEALQYLHSLGVIHCDLKPENILIKNYRKCKIKVIDLGSSCFQTDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDAVVMILARMIGMLGPIDLEMLVRAEETHKYFTKEFDLYYVNEETNQVEYVIPEESSLEQHLQASDTMFIDFVRYLLSINPRTRPTAAEALKHPWLSHVYKSKYKNVH 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0894 695 Gene3D Phosphorylase Kinase; domain 1 376 462 - -
Dere05g0894 695 Pfam Protein kinase domain 383 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0894 695 SUPERFAMILY Protein kinase-like (PK-like) 370 689 IPR011009 -
Dere05g0894 695 CDD PKc_DYRK_like 381 683 - -
Dere05g0894 695 SMART serkin_6 381 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0894 695 FunFam Serine/threonine-protein kinase ppk15 460 684 - -
Dere05g0894 695 ProSiteProfiles Protein kinase domain profile. 381 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0894 695 Gene3D Transferase(Phosphotransferase) domain 1 435 683 - -
Dere05g0894 695 PANTHER DUAL SPECIFICITY PROTEIN KINASE 120 684 - -
Dere05g0894 695 FunFam Putative serine/threonine-protein kinase dyrk2 375 462 - -
Dere05g0894 695 ProSitePatterns Serine/Threonine protein kinases active-site signature. 507 519 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0894 Dere-ChrDere05 14647843 14650880 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0894 378 678 MAP Kinase Gene Family AT5G19010 32.399 3.06e-35 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Dere05g0894 Pkinase 3.7e-51 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g0894 05 14647843 14650880 Dere05g0894 05 14647843 14650880 ECH