Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0875 ATGGGAACCTCTGTGCGCGTCAAAGAGGCTATGGTGATAACCCCTTCCGACCCAACCCCATGCGGTGTCCTCCCACTCTCAGCTCTCGACTCTCAACTCTTTCTTCGTTTCACCATCGAGTACCTCTTGGTCTACAGAGCCTGCCATGACTTCGACCACGATGCCGCATCGGCGTCTCTGAAAGCAGCATTGGCCAGAGCTTTGGTTCCCTATTACCCTCTCGCCGGGAGGGTCAGGGCTAGGCCCGATGGCTCGTGTCTTGAGGTTGTGTGTCGAGCCCAGGGTGCGCTTTTCATTGAGGCCTTTTCTGATCGTTACTCGGCGAGTGATTTCGAGAATAAAGCACCCAAAACAGTGAACCACTGGAGGAAGCTCTTGTCCCTCCCCGTGGCCGATGTTCTCAAAGGATCGCCGCCTCTGGTGGTTCAGCTCACGTGGCTCAGAGACGGGTCCGCCGCTGTCGGCATTGGGATCAACCATTGTCTTTGCGACGGTATCGGAAGCGCCGAGTTTCTCAGCCACTTCGCCGACTTAGCGAGGTCCTCTGTCCTTGCTGAGTCGATCAAACCCAAACCCGTTTGGGATCGTCACCTTCTCAATCCACCACCCACTCGCGACAGTAACCCAGCGATCCTTCCCGAGTTCAAGCGAGTCCCCGATCTCTGCGGGTTCATGGCTCGGGTCTCGAACGACCTCAAACCAACCTCCATTATCTTCGATAGCAGACACCTCAACGAGCTCAAGAGCATCGCTCGCGCCACGAGTCGACTAGGCGATTCGTCGTACACGTCCTTCGAGGTGCTCGCGGCTCACGTGTGGAGGAGCTGGGCAAAGGCATTGGGCTTCCCTACAAACCAGGCACTGAAGCTCCTCTTCAGCATCAACGTTCGGAACCGGGTCAAGCCGGGTCTGCCTGACGGGTACTACGGGAACGCCTTTGTGCTGGGGTGCGCTCAGACCAGCACGAAGGAACTGGTGGAGAGGGAAGTCGGGTACGCGTCGGGTCTGGTGAAGAGGGCGAAAGAGAGAGTGGATGGGGAGTACGTGAGGAGAGTGATTGAGTTGGTGTCCGAGTCGAGGGCGAGTCCTGACTCTGTGGGGGTTCTGATAGTGTCGCAGTGGTCAAGGCTGGGACTGGAGAGGGTTGACTTTGGGATGGGGAAGGCGATGCATGTGGGGCCCATATGCTGCGATAGGTACTGTTTGTTTTTGCCGGTGGAGGATCAGAGCGACGCTGTGAAGGTGATGGTGGCTGTCCCTACATTCGCCGTTGACGACTACATCTATTACCTCACAGCATCGCATTAA 1308 0.5703 MGTSVRVKEAMVITPSDPTPCGVLPLSALDSQLFLRFTIEYLLVYRACHDFDHDAASASLKAALARALVPYYPLAGRVRARPDGSCLEVVCRAQGALFIEAFSDRYSASDFENKAPKTVNHWRKLLSLPVADVLKGSPPLVVQLTWLRDGSAAVGIGINHCLCDGIGSAEFLSHFADLARSSVLAESIKPKPVWDRHLLNPPPTRDSNPAILPEFKRVPDLCGFMARVSNDLKPTSIIFDSRHLNELKSIARATSRLGDSSYTSFEVLAAHVWRSWAKALGFPTNQALKLLFSINVRNRVKPGLPDGYYGNAFVLGCAQTSTKELVEREVGYASGLVKRAKERVDGEYVRRVIELVSESRASPDSVGVLIVSQWSRLGLERVDFGMGKAMHVGPICCDRYCLFLPVEDQSDAVKVMVAVPTFAVDDYIYYLTASH 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0875 435 Gene3D - 225 426 IPR023213 -
Dere05g0875 435 Gene3D - 1 211 IPR023213 -
Dere05g0875 435 PANTHER ACYL TRANSFERASE 4 3 418 - -
Dere05g0875 435 Pfam Transferase family 4 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0875 Dere-ChrDere05 14386313 14387620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0875 5 419 Monolignol Biosynthesis Gene Families AT5G48930 27.982 1.62e-43 156