Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0871 ATGGCTTCCACAACAACAACCTCCTCCTTCTTCTTCCTTCTCATAATCTCTTTGTTCTTCTCCTTCCTTTCTCTTCCATACCCCATTATTCAAGCTTCTTCCAAACACAACGTCTCTGCTCTTTTCGCGTTCGGCGACTCCTCCATTGACTCCGGCAACAACAACCACTTCAAGACTATGCTCCGCAGCGACCACTTTCCCTATGGTCGCGACCTTCCCAGCCACTTCCCTTCTGGAAGGTTCTCGAATGGGAAGCTATCAACTGACTTCCTGGTTCATCTTTTAGGGCTCAAGGATCTACTTCCTGCTTATTTGGACACAACCGTGAGTGATCGTGATCTGCTCACTGGCGTTAGTTTTGGGTCTGCGGGTTCTGGCTTGGATAACCAGACGGTCATCTTCACCGGAGCTATGGGCTTGGCAGGGCAGTTTGAGTTATTTGAGGAGGCTTTGCAGAGGATAAATGAACAAGTTGGAGAAGATGAAGCTAGAAATATTATCGAGAACGCTTTGTTTGTGATCAGTGTCGGGACTAACGACGTGATATATAATGCATATATGTTACCCATGAGGATAATTCAGTATAGTGATATTTCAAGTTACCAGGACTTTCTTATCCAAAATCTTGAGTCTTTCATTGAGAGGGTGTACGGTGCAGGAGCTCGAAGGATTATGGTAACAGGGCTTCCTCCAGTAGGGTGCATCCCTATTCTTGTAACGCTAAGTAGCGTCTCAAACCTCCGGCGTACATGTAACCTCCAAGGCAACACAGATTCTGAAGCCTACAACGCCAAGCTTCTCTCTCATATCCATTCTCTGCAAGCCACTCTCAGTGCTGCCAAGCTTGGCTATTTCGACATCTATACCCCCATGACAGATATGATCCTAAGCCCATCCAGATACGGTAAGAACATTGTAATGAATTTTCATTCTTCTCTAGATTCCTCATGCAACTTTGATGGCATTCAATTTAGTCCCATGTATATTAATGATATATTTTTTGTTTTGCGGGACAGTTTTGATGACAGCAAACAGTGTATTTTTAGCGACGCCATTTGGAAGTTATTTTTGAAAGTATCTGAATCACAGAAAATTATTTTCAATGAGGACTTTAATTATCGCCGCCAAAAAATTACAACTGAAAGTCTTATAAATTCTATAGATGATGTTGTGCTGTTGATTTTGGATTGTGAAGGGTTTGGGAAAACACTCCAAGGATGCTGTGGGACAGGGCTGGTGGAGATGGGTCCCACGTGCGATCCGCTTGTCTCAACTTGCTCAGATCCATCAAAGTATGTGTTTTGGGATGCTGTGCACCCTACTGAAGCAGGATTCTCGGTTATCGCAGATTATGGGCGACGAACTGTGCTTCCATACCTCACTAGTTAA 1389 0.4406 MASTTTTSSFFFLLIISLFFSFLSLPYPIIQASSKHNVSALFAFGDSSIDSGNNNHFKTMLRSDHFPYGRDLPSHFPSGRFSNGKLSTDFLVHLLGLKDLLPAYLDTTVSDRDLLTGVSFGSAGSGLDNQTVIFTGAMGLAGQFELFEEALQRINEQVGEDEARNIIENALFVISVGTNDVIYNAYMLPMRIIQYSDISSYQDFLIQNLESFIERVYGAGARRIMVTGLPPVGCIPILVTLSSVSNLRRTCNLQGNTDSEAYNAKLLSHIHSLQATLSAAKLGYFDIYTPMTDMILSPSRYGKNIVMNFHSSLDSSCNFDGIQFSPMYINDIFFVLRDSFDDSKQCIFSDAIWKLFLKVSESQKIIFNEDFNYRRQKITTESLINSIDDVVLLILDCEGFGKTLQGCCGTGLVEMGPTCDPLVSTCSDPSKYVFWDAVHPTEAGFSVIADYGRRTVLPYLTS 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0871 462 Pfam GDSL-like Lipase/Acylhydrolase 41 451 IPR001087 GO:0016788
Dere05g0871 462 Gene3D SGNH hydrolase 390 456 IPR036514 -
Dere05g0871 462 Gene3D SGNH hydrolase 28 353 IPR036514 -
Dere05g0871 462 CDD SGNH_plant_lipase_like 40 450 IPR035669 -
Dere05g0871 462 SUPERFAMILY SGNH hydrolase 168 451 - -
Dere05g0871 462 PANTHER GDSL ESTERASE/LIPASE EXL3 16 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0871 Dere-ChrDere05 14344727 14346763 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0871 14 302 Pollen Coat Proteome AT1G75910 32.646 2.08e-44 157