Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0868 ATGAAAAGGAACTGGAATTTCAGTCGGTTAAGGGATCGCCAGGGACTTCTGCGCTTTGCGGTGGTGTGGCTGCTCCTTCAGAGCTTGGGTCTGTGCTGCTGTTTAAATGACGAAGGTAAAGCTCTTTTGAAGTTCAGGCAGGGGATAGTGAGTGACCCTTTAGGTGCTTTGTCAAATTGGATTGATGAAGGAGAGCTTGACCCGTGCAATTGGTTCGGAGTTCAGTGCTTAGATGGAAGAGTGGTGGTCTTGAATTTGAAAGATCTATGCCTGGGAGGAACTCTGGCTCCTGAGCTTGCGAACCTTCTTCATATGAAGTCCATTATTTTTCGGAACAATTCTTTCTATGGGATTATCCCAGAAGAAATTGCCAAATTGAAAGAGTTGGAGGTTTTGGATTTGGGATTCAACAACTTCAGTGGAGCTATACCTGCAGACCTTGGGAGTAATATCTCACTAGCAATCCTTTTGCTGGACAACAACGAGCTTCTTGGTGGCTTCTCTCCTGAAATCAACGAACTGAAGTTGCTTTCTGAAAGTCAAGTAGATGAAAACCAGTTAACCAATGTTGCTGAAATGCCATCTTGTGCAGGAAGGTCCATCCCACGGAATGAGGGTCGAGATAATGCAGGTCTTAGGGGACTACTGCAATCTGATCGTCCATATGATAGATCTCGTGCCACCCAGGCTCCATCCCCTTTACCAGACCCTCGATCACCTTCTCCATCTCTATCACCAATATCACCGTTAACATCAAAGCCAACTTTACCTGGTCAAAATACTTCTGCATCTCCTTCTCCATCTGGTCAAAATACTTCTGCTTCTCCTTCTCCATCTGGTCAAAATACTTCTACTTCTCCTTCTGCTCCTACCCTATCTACACCAGGATCTGAAACAAAATCTAAAAGGTCCTCAAATCGTCTTCATGTTGCAATTTTGGCTGGAGGTATAGGCGGTGGTCTATTTCTTATTTTGATCGCTGGTATATACGTCTGTAAAACCAATAAAGTAGCTACTGTCAAACCATGGGCAACAGGACTAAGCGGACAACTTCAGAAGGCATTTGTAACCGGTGTGCCAAAGCTAAAGAGAACAGAACTTGAAGCAGCATGTGAAGATTTCAGTAATGTAATTGGTACTTCACCAATTGGAACAGTGTATAAAGGGACTTTATCTAGCGGAGTTGAAATTGCTGTAGCATCTGTTACCGTAACATCATCCAAGGATTGGTCAAAGACTCTAGAAGTACAGTTTAGGAAGAAGATTGATACATTATCAAAAGTGAACCACAAGAATTTTATCAACCTGCTTGGATATTGTGAAGAAGAAGAGCCTTTCACCAGAATGGTGGTTTTCGAATATGCTCCTAATGGAACACTCTTTGAGCATTTACACATTAAAGAAGCTGAGCACTTGGATTGGGGAACAAGACTCAGAATTGCAATGGGCATGGCGTACTGCCTGCAACACATTCACCGGTTGGACCCTCCTATAGCCCTCGCCAATATGAACTCTTCTGCCGTCTTTCTTACTGAGGACTATGCTGCGAAAATTTCAGAGTTGAGCTTCTTTTATGAAATGGGTTCATCTGAGACAAAGACCAAAGGCAAAAAGCACATTGATATTCCATTAGCAAGTCCAGAAAGCAACGTTTATAACTTCGGTGTTACACTATTTGAAATGGTAACTGCCAGGCTCCCTTATTCAGTTGACAATGGCTCACTTGAAGACTGGGCATCAGATTATTTACGAATTGACCGTCCCTTGAAAGATATGGTGGATCCAACTCTAGCCTCTTTCGAAGAAGAGAAGCTAGAACAAGTTGCTGAATTGATCAAAGCTTGTGTTCATCCTGACCCAAAGCAAAGACCAAATATGAAAGAAGTTAGTTTGAGGCTGAGAGAGATAACAAATATAACACCTGATGCAGCAGTGCCTAGGCTTTCTCCACTTTGGTGGGCAGAGCTTGAGATATGCTCTGCAGATGCAACCTAA 1995 0.4311 MKRNWNFSRLRDRQGLLRFAVVWLLLQSLGLCCCLNDEGKALLKFRQGIVSDPLGALSNWIDEGELDPCNWFGVQCLDGRVVVLNLKDLCLGGTLAPELANLLHMKSIIFRNNSFYGIIPEEIAKLKELEVLDLGFNNFSGAIPADLGSNISLAILLLDNNELLGGFSPEINELKLLSESQVDENQLTNVAEMPSCAGRSIPRNEGRDNAGLRGLLQSDRPYDRSRATQAPSPLPDPRSPSPSLSPISPLTSKPTLPGQNTSASPSPSGQNTSASPSPSGQNTSTSPSAPTLSTPGSETKSKRSSNRLHVAILAGGIGGGLFLILIAGIYVCKTNKVATVKPWATGLSGQLQKAFVTGVPKLKRTELEAACEDFSNVIGTSPIGTVYKGTLSSGVEIAVASVTVTSSKDWSKTLEVQFRKKIDTLSKVNHKNFINLLGYCEEEEPFTRMVVFEYAPNGTLFEHLHIKEAEHLDWGTRLRIAMGMAYCLQHIHRLDPPIALANMNSSAVFLTEDYAAKISELSFFYEMGSSETKTKGKKHIDIPLASPESNVYNFGVTLFEMVTARLPYSVDNGSLEDWASDYLRIDRPLKDMVDPTLASFEEEKLEQVAELIKACVHPDPKQRPNMKEVSLRLREITNITPDAAVPRLSPLWWAELEICSADAT 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0868 664 Pfam Protein tyrosine and serine/threonine kinase 375 630 IPR001245 GO:0004672|GO:0006468
Dere05g0868 664 Pfam Leucine rich repeat N-terminal domain 36 76 IPR013210 -
Dere05g0868 664 ProSiteProfiles Protein kinase domain profile. 372 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0868 664 PANTHER PROTEIN MALE DISCOVERER 2 17 661 - -
Dere05g0868 664 Gene3D Ribonuclease Inhibitor 33 206 IPR032675 -
Dere05g0868 664 Gene3D Transferase(Phosphotransferase) domain 1 455 644 - -
Dere05g0868 664 SUPERFAMILY Protein kinase-like (PK-like) 355 633 IPR011009 -
Dere05g0868 664 MobiDBLite consensus disorder prediction 245 301 - -
Dere05g0868 664 FunFam Inactive receptor-like serine/threonine-protein kinase 346 454 - -
Dere05g0868 664 Gene3D Phosphorylase Kinase; domain 1 344 454 - -
Dere05g0868 664 SUPERFAMILY L domain-like 32 190 - -
Dere05g0868 664 MobiDBLite consensus disorder prediction 193 304 - -
Dere05g0868 664 FunFam Nuclear pore complex protein NUP107 35 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0868 Dere-ChrDere05 14304111 14307936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0868 17 629 Receptor kinase-like Gene Family AT1G66830 25.326 1.07e-45 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Dere05g0868 PK_Tyr_Ser-Thr 6.4e-23 CL0016