Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0864 ATGAGCCACAAAACTTTCCTAGAAAGATTGAGCAGAGTCAGAGATAGCTTACCACCGCCAAAACCCCCTTCTGGCTCACCCGCCGATTCCGAGAAAGCCCCTGAAAACCAAACCATGGCTCCTAACCTCGAATGTCGCATGTACGAGGCCAAGTATCCGGAGGTGGACATGGCCGTTATGATACAGGTCAAGAACATCGCCGACATGGGCGCCTACGTCTCACTGCTCGAGTACAACAACATCGAGGGCATGATCTTGTTCTCCGAGCTCTCTCGCCGTCGGATTCGGAGTGTCAGCAGTCTCATCAAGGTCGGCCGCATCGAGCCCGTCATGGTCCTCAGGGTGGACAAGGAAAAGGGCTACATCGATTTGAGCAAGAGAAGGGTCTCTGAAGAGGATATCCAGGCTTGCGAGGAGAGGTATAACAAGAGCAAGCTTGTCCACTCCATCATGCGTCACGTTGCTGAGACTGAAAATATCGATTTAGAGGAGCTATATATTCACATTGGATGGCCTCTATATCGCAAATATGGTCATGCTTTTGAGGCATTTAAAATAATTGTTACTGATCCTGATTCAGTTTTGAATTCCCTCACCCGTGAAGTCAAGGAGGTTGGCCCTGATGGGCAGGAGGTGACCAAGATCGTTCCAGCTGTGTCAGAAGAAGTGAAGGAAGCTCTAGTAAAGAATATTAGAAGACGAATGACACCCCAGCCCTTGAAAATTAGGGCAGATATTGAAATGAAATGTTTTCAATTTGATGGAGTTCTTCACATTAAGGAAGCTATGCGGAAAGCCGAGGCTGCTGGAAATAATGATTGCCCAGTAAAGATTAAACTCGTTGCCCCCCCACTTTATGTTCTTACCACTCAGACTCTTGACAAGGAGCAAGGAATATTGGTTCTCAACAATGCTATTGTGGCTTGCACTGAAGCAATAGAGCAACACAAGGGTAAACTTCTTGTGAAGGAGGCACCCAGAGCAGTGAGTGAACGGGATGATAAATTGCTTGCTGAGCACATGGCTAAGCTACGCCAAGATAACGAGGAGATCAGTGGCGATGAAGATAGTGAAGAAGAGGAAGATACAGGAATGGGAGAGGTTGATGTGGAAAACCAGGGTGCTGGGATAACAGAGTGA 1140 0.4754 MSHKTFLERLSRVRDSLPPPKPPSGSPADSEKAPENQTMAPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRIRSVSSLIKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETENIDLEELYIHIGWPLYRKYGHAFEAFKIIVTDPDSVLNSLTREVKEVGPDGQEVTKIVPAVSEEVKEALVKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAMRKAEAAGNNDCPVKIKLVAPPLYVLTTQTLDKEQGILVLNNAIVACTEAIEQHKGKLLVKEAPRAVSERDDKLLAEHMAKLRQDNEEISGDEDSEEEEDTGMGEVDVENQGAGITE 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0864 379 Gene3D Translation initiation factor 2; subunit 1; domain 2 130 233 IPR024054 -
Dere05g0864 379 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 39 368 IPR011488 GO:0003723|GO:0003743
Dere05g0864 379 MobiDBLite consensus disorder prediction 1 37 - -
Dere05g0864 379 MobiDBLite consensus disorder prediction 1 15 - -
Dere05g0864 379 FunFam Eukaryotic translation initiation factor 2 subunit 1 240 362 - -
Dere05g0864 379 MobiDBLite consensus disorder prediction 351 367 - -
Dere05g0864 379 SUPERFAMILY Nucleic acid-binding proteins 45 127 IPR012340 -
Dere05g0864 379 FunFam Eukaryotic translation initiation factor 2 subunit alpha 130 234 - -
Dere05g0864 379 Pfam S1 RNA binding domain 53 127 IPR003029 GO:0003676
Dere05g0864 379 SUPERFAMILY eIF2alpha middle domain-like 129 234 IPR024054 -
Dere05g0864 379 FunFam Eukaryotic translation initiation factor 2 subunit alpha 42 129 - -
Dere05g0864 379 MobiDBLite consensus disorder prediction 342 379 - -
Dere05g0864 379 Pfam Eukaryotic translation initiation factor 2 alpha subunit 165 295 IPR011488 GO:0003723|GO:0003743
Dere05g0864 379 SMART S1_6 54 127 IPR022967 -
Dere05g0864 379 SUPERFAMILY eIF-2-alpha, C-terminal domain 238 354 IPR024055 -
Dere05g0864 379 Coils Coil 341 361 - -
Dere05g0864 379 Gene3D - 41 129 IPR012340 -
Dere05g0864 379 ProSiteProfiles S1 domain profile. 56 127 IPR003029 GO:0003676
Dere05g0864 379 Gene3D EIF_2_alpha 240 362 IPR024055 -
Dere05g0864 379 CDD S1_IF2_alpha 53 128 IPR044126 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0864 Dere-ChrDere05 14260863 14268305 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0864 40 379 Eukaryotic Initiation Factors Gene Family AT5G05470 80.645 0.0 531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g0864 05 14260863 14268305 Dere05g0864 05 14260863 14268305 ECH