Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0858 ATGGCGCCTCGAGGAGATGGAGTAATCTCTGTGGATGTTGACTCCCAAGAAAACATGAAAGTTTGTGTGTACAATGACAGAAGTGTAACTTCTAAAGGCATATTCTTTGGGGATTATCCATTCTACTTTACACTTCCCGTCACCTTATTCCAAGTCTCCTTTGTGGCTCTCTTCTCCCAAGTTATTTACTTTGTCCTCAAGCCTATCAAAACACCCAGATGCATCTGTCAGGCTTTTGCTGGTATTCTGGTGGGGCCTTCGTTTCTAGGGCACAACAAAGCATTCAAAGACCGATTTTTCCCGCCAAGTCAATTTGACGTGTTATCGGTAGCGTCCTTACTGGGCATCATATATACGGTTTTCATCATTGCACTGAAAATGGACGTAGCATTGACCTTAAGATCCGCCAAAAGAACATGGAAGCTTGGTATATTACCCTTCTTCTTCAGTTTCTGGGTTATGTTAGCTCTTCTCCACATGTATGGTCCCGATAGTATCCCTGGTCTTCGAACCTCACATGATCGCATCCTCCTCTGTGTCAATGTCTCGTTCAGTAATTTCACCGTCATCTCCCAAGCCTTGCTGGATCTCAACCTTATCACCTCCGAACTAGGCCAAATTGCCTTGTCTTCGGCCATGGTCAATGACATGCTTCACGGGGTTTACTTAGTGTCTGCGTATCTCCTTCGCAGCAAATCAGACGGAAAGCATTCTGTTTTACTTATTTTGATCAGCTTCTGGGCATTCATGGCTTCCTGCGCATTCATTATACGCCCAACATTGCTGATGATTGCGAGAAGAACCTCTCCAGGGAAACCAGTGAAAAAGATTTACATTGTGTTCATACTAGTCGGTGTGCTATTTATGGCATTCATCACTGACTTCATTGGCCTATCATGCCTCTACGGACCTCTGTTCTTCGGTTTAGTTATGCCCAATGGGCCTCCTTTGGGCACGACAGTTTTAGAGAAAACTGAAGTTTTGGTGAACGAGCTCTTTTTGCCTATGGCCTGGGCTTTTTTGGGCGCCCAAATAAATGTGTTTGGAATCTGGAGTTGGGGGGTCGTTTCCAGGGTTAACTTCGTCGTTGTCGCGGGATACGTAGCCAAGGTGGTTGGGTGCATTCTGATTTCGCTATCCTACAAAATCAGGGTCAAACATGGCCTCGTGCTCGGCCTCCTACTCAACATGAAGGGAATCATTGAGTTCATCATTTATACCCGAATGCGGAAAATACAGATGTTGGATGACCAGCTTTTCTATTTCCTGGTGTTCTCTACGGTGTTGACGACTACGATTCTGCATCCTTTCGTTGAGTTGCTATACAAGCCTCATACTCGATTAGATAGTTACAGTAAACATCACAAGCCTATAAGAACGATCCAAGGCACTTACAGAAACCCAGAGTTCAGCATCGTTTGTTGCGTACACAACGAAGGGAATGTTCGGAGCCTCATCTCCCTCATAGAAGCCTGCAATCCGGATATGTCAAGCGCAATCTGTGCCTACGTGGTGCATCTCATCGAGCTCCAAGGTACAAGCACGCCTTTCCTCCTCCCCGTGGACCTGCAAAGAAGAAGATTCTCGTCATTCAACTACCCCATCACCCACCACATCATGCGAGCCTTCGAGAACTACTCCTGCAAATCCGACGGTCTCCTCACAGTCTTACCCTACATGAACGTGGCACCCTACAAGAACATGCACGAAGCTGTCTGCAACCTCGCACAGGACAAGCTGGTCTCACTCATCATCCTTCCCTTCCACGAAAACGACCAGTTACGTGGCAGTCTCAAGACCTTTACCATCCGCGACCTCAACCATAACTTCCAACTCTACACGCCGTGCACGGTGGGTATCCTGGTGGACCGGTTCTCGCAGCTAGGCATGACCGTGTCGACCGACATCGGCTTCCACGTGGCCATCTTCTTCCTCGGTGGGCCCGACGACCGGGAGGCTCTGGCGTTGGGGAATCGGATGTCGGAGCACACGAACATGAGGGTGACGTTGTTTTGGTTTGTGGTGAAGAACGATTATATGGGTGATGTGAGTGATAACGAAGAAGATAGAATGGGAAAGTTTGATAGGAAACTTTCAGAAGGGCATGAAGGGGAAGAGAGGGCATGGGACGAGAGTGTGATAGATGAGTTCAAGGCGAAGAACATGGGGAATGGGAACGCGGTGTGCCAGGAGATAGAGGTGGAGGATGGGGTGAGGGTTTTGGAGGCAATAAGGGGATTGGAAGGGAACTATGACCTAATAATGGTAGGGCAAAGGCATAATTTGGGAGGTTTAGAAGATAAAGAGATGTCCAATTTTATGGAGAATGTGGAGACGTTGGGGATTATTGGGGACATGTTGGCGTCCTCGGAGTTCTGTAATGGGATGGTTCCAGTGTTGGTGATGCGAAGTGGTATGAAGCAACCAAAAAGACTTCGTAGCTTAGATTCCACTGCCATCTCCCACAGGAGTTTTGGTTCAAAATTTGCTAGCTAG 2496 0.476 MAPRGDGVISVDVDSQENMKVCVYNDRSVTSKGIFFGDYPFYFTLPVTLFQVSFVALFSQVIYFVLKPIKTPRCICQAFAGILVGPSFLGHNKAFKDRFFPPSQFDVLSVASLLGIIYTVFIIALKMDVALTLRSAKRTWKLGILPFFFSFWVMLALLHMYGPDSIPGLRTSHDRILLCVNVSFSNFTVISQALLDLNLITSELGQIALSSAMVNDMLHGVYLVSAYLLRSKSDGKHSVLLILISFWAFMASCAFIIRPTLLMIARRTSPGKPVKKIYIVFILVGVLFMAFITDFIGLSCLYGPLFFGLVMPNGPPLGTTVLEKTEVLVNELFLPMAWAFLGAQINVFGIWSWGVVSRVNFVVVAGYVAKVVGCILISLSYKIRVKHGLVLGLLLNMKGIIEFIIYTRMRKIQMLDDQLFYFLVFSTVLTTTILHPFVELLYKPHTRLDSYSKHHKPIRTIQGTYRNPEFSIVCCVHNEGNVRSLISLIEACNPDMSSAICAYVVHLIELQGTSTPFLLPVDLQRRRFSSFNYPITHHIMRAFENYSCKSDGLLTVLPYMNVAPYKNMHEAVCNLAQDKLVSLIILPFHENDQLRGSLKTFTIRDLNHNFQLYTPCTVGILVDRFSQLGMTVSTDIGFHVAIFFLGGPDDREALALGNRMSEHTNMRVTLFWFVVKNDYMGDVSDNEEDRMGKFDRKLSEGHEGEERAWDESVIDEFKAKNMGNGNAVCQEIEVEDGVRVLEAIRGLEGNYDLIMVGQRHNLGGLEDKEMSNFMENVETLGIIGDMLASSEFCNGMVPVLVMRSGMKQPKRLRSLDSTAISHRSFGSKFAS 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0858 831 Gene3D - 47 450 IPR038770 -
Dere05g0858 831 PANTHER CATION/H + ANTIPORTER 23 803 - -
Dere05g0858 831 Pfam Sodium/hydrogen exchanger family 54 438 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0858 Dere-ChrDere05 14166348 14169504 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0858 14 803 Antiporter Super Family AT2G13620 33.623 3.67e-142 438