Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0850 ATGGGGAAGAGCAATCTTAGGCACAACCCTTCTCCAGTTTTGCAGCTGGGGATTAGAAATGCAGTAGATTGGCACTATATTTTGGATAAGAAGAGAGAGAAGTGGAAGAATCGGTGTATATCCCAAAACCCAGTTCATTGGTTCCTCTGGATCCCATATGTGTGCATTCTTCTGCTCCCCATTTGTGTGAAGCCAGCTTTGGGTGGTGAAGGGGATCGTTGGGATGGAGTGGTTGTCACAGAATCAAATTTCCTGGCACTTCAAGCGTTCAAGCAAGAGCTAATTGATCCCAAAGGCTTCTTGCGAAGCTGGAATGACAGTGGCTACGGAGCTTGCTCTGGAGGATGGGTTGGAATCAAGTGTGCTCAGGGGCAGGTTATCGTGATCCAGCTTCCATGGAAGGGACTGAAAGGGCATATCACGGAGAGGATAGGCCAACTCGAAGGACTTCGGAAGCTTAGTCTTCATGATAACCAAATTGGTGGGTCAATCCCTTCAGCGTTGGGACTCCTTCCCAATCTCAGAGGGGTTCAGCTATTCAACAATCGGCTAGAAGGGTCAATTCCTCCTTCGTTAGGTTCATGTCCTTTTCTTCAGTCTTTAGACCTAAGTAATAACTTACTCACAGGGAGAATCCCTGATAGCCTTGCCAATTCTACCAAGCTTTGTTGGCTTAATTTGAGCTTCAATTCCTTATCTGGTTCAATACCAATAACCCTCACTCGGTCACCTTCTCTCACCTTCCTTTCTCTTCAACACAATAATCTCTCTGACTCTATCCCAAACTCATGGGGTGGGACTCTGGGAAACAGCTTCTTTCGGCTTCAGAATTTGATTCTAGATCATAACTTCTTCTCTGGGAGCATTCCTCCTTCTTTGGGCAGCTTGAGTGAACTCAGAAATATTTCCCTCAGTCATAACCATCTCACTGGAGCCATCCCAAATGAAATTGGGAATCTTTCTAGGCTTACAACGTTAGATTTTTCTAATAATGCCTTGAACGGAAGCTTGCCTGCTAGTCTCTCAAGTTTGTCCTTGCTTACTTTGTTGAATGTTGAGAACAACCACCTCGACGACCAAATCCCAGAATCTCTAGGTACATTATTACGTAACCTTTCTGTTCTTAGTTTGAGCAGAAACCAATTTAGTAGTCACATTCCTGCAAGTATCGGCAATATTTCCTCGCTTACACAGCTTGATTTGTCACTGAATAATCTCAGTGGTGAAATTCCATCCTCCTTCAACAATTTACGAAGTCTTGATTTCTTCAATGTTTCTTACAATAACCTCTCAGGTCCTGTACCTAGTCTACTTGCCAAGAAATTTAACTCGAGCTCATTTGTGGGGAATATTCAACTATGTGGGTACACTCCTTCAACCCCGTGCCCTTCTCAAGCCCCATCAGAGATAACCTCTGTCTCAGGCCGTCATCATAGGAAACTAAGTACCAAAGACATAATTCTCATAGTAGCAGGAGCTCTCCTTGTACTCTTGGTAATACTTTGTTGCATCCTACTCTTTTTCTTGCTCAGAAAGCGAGCAACATCGAAAGCAGAGAATGGCCAGGGTACGGGGGCAGCCGGCACTGCCGGGACAGAGAAAGGGGTCGCTGCAGCTGCCGCCGGTGCAGCTGAAGCGGGTGGCGAGGCTGGAGGGAAACTAGTCCATTTTGATGGGCCAACGGCTTTTACAGCTGATGATCTTTTGTGTGCAACGGCGGAGATAATGGGAAAGAGCACCTACGGAACTGTGTACAAGGCTACACTGGGGGATGGAAGCGAAGTTGCAGTGAAGAGACTGAGGGAAAAGATTACAAAAAGTCAGAGAGAATTTAAGTCTGAGATAAACATTCTTGGGAAAATTCGTCACCCAAATCTTCTGGCACTGAGGGCATATTATTTGGGACCCAAGGGGGAAAAGCTTCTAGTTTTTGACTACATGCCTAAAGGAAGTCTTGCTGCTTTCCTGCACGCTCGTGGGCCAGAAACAGCCATAGATTGGCCAACAAGGATGAGAATAGCACAAGGCATGGCTCGTGGCTTGTTCTGCCTTCATTCCAATGAGAACATCATACATGGGAACCTGACATCCAGCAATGTCCTGCTTGACGAAAACACAAATGCTAGAATTGCAGATTTTGGTCTTTCTCGATTGATGACAACTGCTGCTAGTTCTAATGTGATTGCCACAGCCGGAGCGTTAGGCTACCGGGCGCCGGAGCTCTCAAAGCTGAAGAAAGCAAACAAAAAAACTGATGTGTACAGCCTCGGTGTGATCTTGTTGGAACTCCTAACAGGGAAATCACCAGGTGAGGCTAATGGGGTGGATTTACCACAGTGGGTTGCCTCCATTGTGAAAGAAGAGTGGACGAATGAGGTATTCGACGTTGAGTTGATGAGAGATGCATCTACGATTGGTGATGAGTTGCTGAACACATTGAAGCTCGCTTTGCACTGTGTTGATCCTTCTCCATCAGCACGACCAGAAGTTCAGCAAGTGCTACAGCAATTAGAAGAAATTAGACCAGAGAGACCAGTCAGTCCTGGGGATGAAGGAGCCATCCCCTCAACCAGTGACTAG 2580 0.4612 MGKSNLRHNPSPVLQLGIRNAVDWHYILDKKREKWKNRCISQNPVHWFLWIPYVCILLLPICVKPALGGEGDRWDGVVVTESNFLALQAFKQELIDPKGFLRSWNDSGYGACSGGWVGIKCAQGQVIVIQLPWKGLKGHITERIGQLEGLRKLSLHDNQIGGSIPSALGLLPNLRGVQLFNNRLEGSIPPSLGSCPFLQSLDLSNNLLTGRIPDSLANSTKLCWLNLSFNSLSGSIPITLTRSPSLTFLSLQHNNLSDSIPNSWGGTLGNSFFRLQNLILDHNFFSGSIPPSLGSLSELRNISLSHNHLTGAIPNEIGNLSRLTTLDFSNNALNGSLPASLSSLSLLTLLNVENNHLDDQIPESLGTLLRNLSVLSLSRNQFSSHIPASIGNISSLTQLDLSLNNLSGEIPSSFNNLRSLDFFNVSYNNLSGPVPSLLAKKFNSSSFVGNIQLCGYTPSTPCPSQAPSEITSVSGRHHRKLSTKDIILIVAGALLVLLVILCCILLFFLLRKRATSKAENGQGTGAAGTAGTEKGVAAAAAGAAEAGGEAGGKLVHFDGPTAFTADDLLCATAEIMGKSTYGTVYKATLGDGSEVAVKRLREKITKSQREFKSEINILGKIRHPNLLALRAYYLGPKGEKLLVFDYMPKGSLAAFLHARGPETAIDWPTRMRIAQGMARGLFCLHSNENIIHGNLTSSNVLLDENTNARIADFGLSRLMTTAASSNVIATAGALGYRAPELSKLKKANKKTDVYSLGVILLELLTGKSPGEANGVDLPQWVASIVKEEWTNEVFDVELMRDASTIGDELLNTLKLALHCVDPSPSARPEVQQVLQQLEEIRPERPVSPGDEGAIPSTSD 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0850 859 Pfam Leucine rich repeat N-terminal domain 85 121 IPR013210 -
Dere05g0850 859 Gene3D Phosphorylase Kinase; domain 1 576 647 - -
Dere05g0850 859 SUPERFAMILY L domain-like 120 454 - -
Dere05g0850 859 Gene3D Ribonuclease Inhibitor 240 336 IPR032675 -
Dere05g0850 859 Gene3D Ribonuclease Inhibitor 337 463 IPR032675 -
Dere05g0850 859 FunFam Pollen receptor-like kinase 1 647 848 - -
Dere05g0850 859 SUPERFAMILY Protein kinase-like (PK-like) 574 838 IPR011009 -
Dere05g0850 859 CDD STKc_IRAK 576 840 - -
Dere05g0850 859 SMART LRR_typ_2 244 266 IPR003591 -
Dere05g0850 859 SMART LRR_typ_2 320 343 IPR003591 -
Dere05g0850 859 SMART LRR_typ_2 296 319 IPR003591 -
Dere05g0850 859 SMART LRR_typ_2 171 195 IPR003591 -
Dere05g0850 859 SMART LRR_typ_2 369 392 IPR003591 -
Dere05g0850 859 SMART LRR_typ_2 147 170 IPR003591 -
Dere05g0850 859 SMART LRR_typ_2 393 416 IPR003591 -
Dere05g0850 859 SMART LRR_typ_2 344 368 IPR003591 -
Dere05g0850 859 Gene3D Transferase(Phosphotransferase) domain 1 648 847 - -
Dere05g0850 859 FunFam Leucine-rich repeat receptor-like protein kinase 556 646 - -
Dere05g0850 859 MobiDBLite consensus disorder prediction 837 859 - -
Dere05g0850 859 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 284 840 - -
Dere05g0850 859 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 265 466 - -
Dere05g0850 859 ProSiteProfiles Protein kinase domain profile. 570 840 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0850 859 Gene3D Ribonuclease Inhibitor 81 239 IPR032675 -
Dere05g0850 859 Pfam Protein tyrosine and serine/threonine kinase 573 837 IPR001245 GO:0004672|GO:0006468
Dere05g0850 859 Pfam Leucine rich repeat 298 357 IPR001611 GO:0005515
Dere05g0850 859 Pfam Leucine rich repeat 370 430 IPR001611 GO:0005515
Dere05g0850 859 Pfam Leucine rich repeat 198 256 IPR001611 GO:0005515
Dere05g0850 859 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 80 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0850 Dere-ChrDere05 14082001 14084664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0850 74 842 Receptor kinase-like Gene Family AT3G51740 65.039 0.0 956
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dere05g0850 PK_Tyr_Ser-Thr 7.5e-42 CL0016