Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0837 ATGTCGCCGCCCGCCAGAGCGCTCGTCCCTCTCTTGCCAGAAAGCAAAGGTGCGGTGAAGCCAGCGACCGTCTCCGGCGCTGTTTTCAATGTGGCGACGAGCATTATTGGTGCCGGAATCATGTCAATTCCGGCGACCTTGAAGGTTCTGGGGGTAATCCCGGCTCTCGTGATGATCCTGGTCATAGGTTTTCTGTCTGAAATATCAGTGGACTTCCTTATGAGGTTTACGCATTCCGGCGAGAGCACCACATATGCTGGCGTGATGAGGGAGGCTTTCGGGCCGGTTGGAGCAGTTGCCACACAAATTTCTGTCATGATTACAAATCTTGGGTGTTTAATTATGTTCCTAATTATCATCGGGGACGTGCTCTCTGGAAATTCACCTGGAGGTGAGGTACACTTGGGGATTTTGCAACAATTGTTCGGAATTCATTGGTGGACTTCCCGGGAGTTTGCTCTGCTGGTGACCTTACTCTTCGTTATGCTTCCATTGGTCTTTTACCGACGTGTGGAGTCTTTAAAGTTCAGTTCTGCAATATCAACCCTTCTAGCAGTGGCATTCGTCGGCATATGTTCTGGGATGGCAATCACTGCTCTGATCGCAGGAAAAACACATACCCCAAGATTGTTTCCTCAGTTAGACCACCACACCTCCATTTTTGATCTATTCACTGCCGTTCCAGTCATAGTCACTGCCTTCACCTTTCATTTTAATGTGCATCCAATTGGGTTTGAGCTTGCCAAGCCATCTGACATGACAATAGCTGTTCGAATAGCCTTAGTTCTCTGTGCTACCATATACTTTGCAATAGGCCTATTTGGGTATCTTCTGTTTGGGGATTCAACGCAGTCAGACATACTCGTCAACTTCGATCAGAATACTGAATCTCCAATTGGTTCCATGCTCAATACTTTAGTCCGATTAAGCTATGCTTTCCACGTCATGCTGGTGTTCCCTCTCTTGAACTTCTCTCTGAGAGCCAACTTAGACGAGCTTCTCTTCCCCAACAAGCCTCTGCTAGCCACAGACAAAAGAAGATTTGTGACCCTCACCCTGCTGCTCCTAGCCTTCTGCTACCTTATTGCTATAGCATTCCCAGATATTTGGTACTTATTTCAGTTCGTGGGATCAACATCTGCGGTGTGCATTGTCTTCATCTTCCCTGGTGCCATTGCTTTAAGGGATGCTCAAGGTATATCAACCAGAAGCGACAAAATCGTAGCACCAATAATGATTATCCTGGCGGCAGTAACAAGTGTGATCGCCATATCTACCAATTTATACAACTTCTTCGGTAGCAAGTCATAA 1311 0.4683 MSPPARALVPLLPESKGAVKPATVSGAVFNVATSIIGAGIMSIPATLKVLGVIPALVMILVIGFLSEISVDFLMRFTHSGESTTYAGVMREAFGPVGAVATQISVMITNLGCLIMFLIIIGDVLSGNSPGGEVHLGILQQLFGIHWWTSREFALLVTLLFVMLPLVFYRRVESLKFSSAISTLLAVAFVGICSGMAITALIAGKTHTPRLFPQLDHHTSIFDLFTAVPVIVTAFTFHFNVHPIGFELAKPSDMTIAVRIALVLCATIYFAIGLFGYLLFGDSTQSDILVNFDQNTESPIGSMLNTLVRLSYAFHVMLVFPLLNFSLRANLDELLFPNKPLLATDKRRFVTLTLLLLAFCYLIAIAFPDIWYLFQFVGSTSAVCIVFIFPGAIALRDAQGISTRSDKIVAPIMIILAAVTSVIAISTNLYNFFGSKS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0837 436 PANTHER AMINO ACID TRANSPORTER 18 419 - -
Dere05g0837 436 Pfam Transmembrane amino acid transporter protein 22 424 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0837 Dere-ChrDere05 13927230 13929116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0837 1 430 Amino Acid or Auxin Permease AAAP Family AT3G56200 61.949 0.0 517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g0837 05 13927230 13929116 Dere05g0837 05 13927230 13929116 CCT
Dere05g0837 05 13927230 13929116 Dere05g0837 05 13927230 13929116 ECH