Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0828 ATGGATTGCTCTGTATGCACAACGATGCCATTAATATTAAGGCCTCCCAGGAACACCATATGTGGGGCCTGTTATGAAGGAGCAAGGAGCATTCTCAGTATGATGAACAAGCTTGAATCTGATAAACCAATAGATACTCATAATGCCTCGCCTGTATCACCCACTCAAAATTCGAGTAAGTCTCTTTCGGGAGTTAAAAGATGGTGTATAGAGCAGTTAGATCTGATGAACCAACAAAAGGATCAAGTGGCCTTCCTTAGAAGCTCTGTTGATGCCTTCAGATCACAAATCCACACTGATATAATGGTCACTCCTGGCGAACATGGGCCTCCAATACCTTCGCATAAGGCTGTTTTGGCGACAAGATCAGATATTTTCAAGAACATGCTGGACTCAGACGAATGCAAAGCTGCACCTGTTAACAACATTACGATACCCGAACTGAACTACGAAGAGCTAGAGTGTCTTCTGGAGTTTCTCTACAGTGGGACCTTGAGTCCAGAAAAATTGGAGAAGCATGTGTACGCCTTGTCACTAGCAGCTGATAAATATGTGATCCCATACTTGCAGAAGCATTGTGAGCGATATATGCAGAATTCACTAAGCATTTCCAATGCACTTGATGTGTTAGAGATTGCAGACACTTGCTCCAACCAGGAGTTGAAGGACACCACTATAAAGTTCTTAGTTGAAAATATTGGGGAGATAGTCTTGTCCTCTAGATACGAAGCATTTGTGCACAGATGCCCTCATCTAACTGTGCAACTTACGAGAGAGTCAGTGAAGGCTGTCAATGTCAAATGA 804 0.4303 MDCSVCTTMPLILRPPRNTICGACYEGARSILSMMNKLESDKPIDTHNASPVSPTQNSSKSLSGVKRWCIEQLDLMNQQKDQVAFLRSSVDAFRSQIHTDIMVTPGEHGPPIPSHKAVLATRSDIFKNMLDSDECKAAPVNNITIPELNYEELECLLEFLYSGTLSPEKLEKHVYALSLAADKYVIPYLQKHCERYMQNSLSISNALDVLEIADTCSNQELKDTTIKFLVENIGEIVLSSRYEAFVHRCPHLTVQLTRESVKAVNVK 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0828 267 SUPERFAMILY POZ domain 85 200 IPR011333 -
Dere05g0828 267 ProSiteProfiles BTB domain profile. 99 169 IPR000210 GO:0005515
Dere05g0828 267 Gene3D - 202 266 - -
Dere05g0828 267 SMART BTB_4 99 201 IPR000210 GO:0005515
Dere05g0828 267 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 20 264 IPR044784 -
Dere05g0828 267 CDD BACK 202 247 - -
Dere05g0828 267 Pfam BTB/POZ domain 94 200 IPR000210 GO:0005515
Dere05g0828 267 Gene3D Potassium Channel Kv1.1; Chain A 70 201 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0828 Dere-ChrDere05 13747768 13751798 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Dere05g0828 BTB 1.3e-21 CL0033
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g0828 05 13747768 13751798 Dere05g0828 05 13747768 13751798 ECH