Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0814 ATGGAGAAAAGGGGGAATGTGTTGATGCAAAAGTTTGAGTTTGGCAGATTATTAGGTCAAGGAAATTTTGCAAAAGTTTACCATGCAAGGGACCTTAGAACTGGTGAGAATGTTGCCATAAAGGTGATTGACAAGGAGAAGGTTCAGAAAGTTGGGCTAGTTGATCAAACAAAGCGAGAAATATCGGTTATGAGACTGGTTAAACATCCGAATGTAATGCAGCTTTATGAGGTCTTGGCCACCAAAACCAAGATTTATTACATCATAGAATATGCCAAGGGGGGTGAACTTTTCAGCAAGGTAGCTAAAGGTAGACTCCATGAGAGTGTGGCAAGGAGGTACTTTCAACAATTGATCAGCGCTGTAGAATTTTGCCACAGCAGGGGTGTTTATCACAGGGATTTGAAGCCGGAGAATTTACTTTTGGATGAGAATGGTATTCTCAAGGTTGCAGATTTTGGATTGAGTGCCCTTGTTGAATCTCATCGTCAAGGAAGCTTGCTGCACACGGCTTGTGGAACTCCTGCATATGTAGCTCCTGAAGTTATAAGTAGAAAAGGCTATGATGGAGCAAAAGCTGACATATGGTCTTGTGGAGTGATCTTATATGTTCTATTGGCTGGTCATTTGCCGTTCCATGATATGAATCTTATGGCATTGTACAGGAAAATAGGCAAGGCACAGTACAAATGTCCGAACTGGTTTTCTTTTGAAGTGCGCAGGCTGTTGGCCAGAATCCTTGACCCTAACACTGATACTAGAATTTCCATATCAAAAATTATGGAAAGTTCCTGGTTCAGAAAAGGATCTAGTTCCAAGGCTGATACAATGAAAACAGATATGGCTGATTCAGTCAAGGCTGATGCAAGTTTTGGTCTATGTGAGAATGAAAGAAGTGCTGCTACTGAGGCAAATCAAGCACTGGTAAAACCTACCAATTTGAATGCTTTTGATATAATTTCTCTATCAGCTGGCTTTGACTTGTCCGGGCTTTTTGCGAGAAACAATGAAAGGAAATATGTGAAATTTACATCCCTGCACTCTGCCTCATCTATCATTACTGCAATTGTCGATATTGCACGCGTTTTGAAGCTAAAGATAACGAAGAAGGATGAGGGGTTGCTGAAGTTAGAGAGATCTAGCGAAGAAAGGAGGCATCCCCTATCCATTGATGCTGAAATATTTGAGTTTACCCCATCTTTCCATTTGGTTGAGATGAAGAAGTCTAGCGGTGATACATTAGAATACCAGAAGATTTTAAAGGAGGATATAAGACCGGCTCTCAGAGATATTGTCTGGGCTTGGCAAGATGAGCAGCAATAG 1323 0.4119 MEKRGNVLMQKFEFGRLLGQGNFAKVYHARDLRTGENVAIKVIDKEKVQKVGLVDQTKREISVMRLVKHPNVMQLYEVLATKTKIYYIIEYAKGGELFSKVAKGRLHESVARRYFQQLISAVEFCHSRGVYHRDLKPENLLLDENGILKVADFGLSALVESHRQGSLLHTACGTPAYVAPEVISRKGYDGAKADIWSCGVILYVLLAGHLPFHDMNLMALYRKIGKAQYKCPNWFSFEVRRLLARILDPNTDTRISISKIMESSWFRKGSSSKADTMKTDMADSVKADASFGLCENERSAATEANQALVKPTNLNAFDIISLSAGFDLSGLFARNNERKYVKFTSLHSASSIITAIVDIARVLKLKITKKDEGLLKLERSSEERRHPLSIDAEIFEFTPSFHLVEMKKSSGDTLEYQKILKEDIRPALRDIVWAWQDEQQ 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0814 440 Gene3D Kinase associated domain 1, KA1 309 434 - -
Dere05g0814 440 Gene3D Transferase(Phosphotransferase) domain 1 92 291 - -
Dere05g0814 440 SUPERFAMILY Protein kinase-like (PK-like) 8 267 IPR011009 -
Dere05g0814 440 Pfam NAF domain 311 369 IPR004041 GO:0007165
Dere05g0814 440 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Dere05g0814 440 FunFam Non-specific serine/threonine protein kinase 2 291 - -
Dere05g0814 440 ProSiteProfiles NAF domain profile. 309 333 IPR018451 GO:0007165
Dere05g0814 440 FunFam Non-specific serine/threonine protein kinase 309 433 - -
Dere05g0814 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Dere05g0814 440 Pfam Protein kinase domain 13 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0814 440 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 428 - -
Dere05g0814 440 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g0814 440 CDD CIPK_C 315 429 - -
Dere05g0814 440 Gene3D Phosphorylase Kinase; domain 1 2 91 - -
Dere05g0814 440 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Dere05g0814 440 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0814 Dere-ChrDere05 13632708 13634030 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0814 1 439 CBL-interacting serine-threonine protein kinases AT5G58380 62.031 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Dere05g0814 Pkinase 1.6e-71 CL0016