Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0805 ATGACATTCAAGAGAAGGAATGGCGGACGCAACAAGCATGGCCGTGGACATGTCAAATTCATTCGATGCTCCAACTGTGGCAAATGCTGTCCCAAGGACAAGGCAATCAAGAGGTTCCTTGTAAGGAACATTGTTGAGCAAGCCGCTGTTAGAGATGTTCAGGAAGCCTGTGTCTATGAACAATACACTCTCCCCAAGCTGTATGTGAAGATGCAGTATTGTGTTTCCTGTGCTATCCACTCTCATGTAGTGAGAGTTCGTTCTCGTACTGATAGGAGGAACCGTGAGCCACCACAGCGCTTCATCAGGCGCAGGGATGATGCACCAAGGCCTGGTCAACCTAGTCAAGCACCTCGTCCTGCTGGAGGAGTTGCTGCTCGCGCCTAA 387 0.5039 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRNREPPQRFIRRRDDAPRPGQPSQAPRPAGGVAARA 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0805 128 MobiDBLite consensus disorder prediction 89 110 - -
Dere05g0805 128 Gene3D Ribosomal protein S26e 1 115 IPR038551 -
Dere05g0805 128 PANTHER 40S RIBOSOMAL PROTEIN S26 1 123 IPR000892 GO:0003735|GO:0005840|GO:0006412
Dere05g0805 128 MobiDBLite consensus disorder prediction 86 128 - -
Dere05g0805 128 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Dere05g0805 128 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Dere05g0805 128 FunFam 40S ribosomal protein S26 1 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0805 Dere-ChrDere05 13559843 13561804 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0805 1 116 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 83.621 4.98e-69 202