Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0796 ATGTCATTTCCCGGCCAGCCTTTTCCCTCCTCTCGAGGCCCCTTCCACCGGCGCGCCCAATCCGAGGGTCAATTCCGACTCCCCGACGACTTCTATCTCGAACCGAGCCCCTTCGATGGCCCCTCCATCGCCTTCGAAGATCTAGGATCAGAGGATGACCTCTTTTCCGCTTACATGGACTTTGACAAGTCCGGATCCAATCTTGACATTGGATCCTCTGACCATAAACCAGGAACCTTGGAGAGTAACGCAAATGCTCGAACCGCCGGTAGTAGCAGCGTCAGTGAGAAGCCATCGAGACCTAGGCATCGGCACAGCAATTCTGCCGATGAAACTACCGTGTTCGAGGCCATTGAGGCTAAGAAGGCAATGGCTCCCGATAAGCTTGCTGAACTGTGGACCGTTGATCCCAAGCGAGCGAAGAGGATTCTCGCAAATCGCCAATCTGCGGCTCGTTCAAAAGAGAGGAAAACTCGCTATGTATTAGAACTTGAGAGGAAAATTCAAACCCTTCAAACAGAAGCAACTACTCTTTCTGCGCAATTAAATCTTTTCCAGAGAGACACAACTGGTTTGACTAGTGAAAATACAGAGCTTAAGTTTCGGTTACAAGCAATGGAGCAACAAGCTAAGATACGTGATGCTCTAAATGATGCACTGAAGAAAGAGGTTGATAAGCTGAAGGTTGCTACTGGAGAGACAGTTACTCCAACTCCAATTCCAACCCAAACCTATAATATGCAAGTGCATCAAATTCCATTCTCTCAAGGATCCTTCTTCTTACATCAGCTGCAGCATGGACCAGTTGAACCTCAGACCATGCAAATGCAGCAGTTGCACTCATTCTCATCTAATGTGTCAAATCCTCATCAACCTCTGCTTGCTGTAGCCAACACACAAGATTTGTCAGAAATGTTGCCACAGGAATCTATTGGCCAATTTCAAGGCCTTGAGATAAGCACCAGGGGTGCTCATCTTCTGATGCCTGATGGTCCTTCCAGCTGTGTCAAACAAATCAGCAGTGCCTTTTGA 1032 0.4787 MSFPGQPFPSSRGPFHRRAQSEGQFRLPDDFYLEPSPFDGPSIAFEDLGSEDDLFSAYMDFDKSGSNLDIGSSDHKPGTLESNANARTAGSSSVSEKPSRPRHRHSNSADETTVFEAIEAKKAMAPDKLAELWTVDPKRAKRILANRQSAARSKERKTRYVLELERKIQTLQTEATTLSAQLNLFQRDTTGLTSENTELKFRLQAMEQQAKIRDALNDALKKEVDKLKVATGETVTPTPIPTQTYNMQVHQIPFSQGSFFLHQLQHGPVEPQTMQMQQLHSFSSNVSNPHQPLLAVANTQDLSEMLPQESIGQFQGLEISTRGAHLLMPDGPSSCVKQISSAF 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0796 343 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 136 199 IPR004827 GO:0003700|GO:0006355
Dere05g0796 343 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 10 290 - -
Dere05g0796 343 MobiDBLite consensus disorder prediction 1 34 - -
Dere05g0796 343 SMART brlzneu 134 198 IPR004827 GO:0003700|GO:0006355
Dere05g0796 343 MobiDBLite consensus disorder prediction 66 112 - -
Dere05g0796 343 FunFam probable transcription factor PosF21 137 190 - -
Dere05g0796 343 Gene3D - 137 190 - -
Dere05g0796 343 Coils Coil 154 188 - -
Dere05g0796 343 MobiDBLite consensus disorder prediction 97 112 - -
Dere05g0796 343 SUPERFAMILY Leucine zipper domain 138 192 IPR046347 GO:0003700|GO:0006355
Dere05g0796 343 Pfam bZIP transcription factor 138 196 IPR004827 GO:0003700|GO:0006355
Dere05g0796 343 CDD bZIP_plant_RF2 139 188 IPR044759 GO:0003700|GO:0006355
Dere05g0796 343 MobiDBLite consensus disorder prediction 66 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0796 Dere-ChrDere05 13492041 13496151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0796 12 323 bZIP Transcription Factor Family AT2G40620 52.870 1.44e-99 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere05g0796 bZIP_1 2.2e-08 CL0018