Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere05g0795 | ATGGCTCGCCTACTGCTAGACACAGAATCAACTTCGACATCTACCCCAGCAGGTAGTGGAAACAGAACAGGGGGTTCCTACCCAAGTGATGCCAACTTTGACACAAACATGGTGATTATACTAGCAGCCTTGCTCTGTGCACTAATATGTGCTTTAGGGCTAAATTCAATTGTAAGATGTGCTTTAAGATGCAGCAGAAGGTTTGCTTTTGAGACACCAGATGAGGCAGCAGCTCGTTTAGCATCAAAAGGGTTGAAGAAGAGTGCATTGCGTCAGATCCCTATTGCTGTGTATGGTTCATCAGGTACTTCTAATATTGCAGCCACTGAGTGTCCAATTTGCCTAGGAGAGTTTGTGGAGGGGGAGAAAGTGAGGGTGCTTCCTAAATGCAACCATGGCTTCCATGTGAGGTGTATAGACACATGGCTCCTCTCACACTCCTCTTGCCCTACTTGCAGACAGTCTTTGCTTGAACAGACCAGTCCAAACACTTCTGGGAATGTATAG | 507 | 0.4635 | MARLLLDTESTSTSTPAGSGNRTGGSYPSDANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETPDEAAARLASKGLKKSALRQIPIAVYGSSGTSNIAATECPICLGEFVEGEKVRVLPKCNHGFHVRCIDTWLLSHSSCPTCRQSLLEQTSPNTSGNV | 168 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere05g0795 | 168 | FunFam | RING-H2 finger protein ATL72-like | 76 | 157 | - | - | |
Dere05g0795 | 168 | CDD | RING-H2_EL5-like | 110 | 153 | - | - | |
Dere05g0795 | 168 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Dere05g0795 | 168 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 69 | 158 | IPR013083 | - | |
Dere05g0795 | 168 | Pfam | Ring finger domain | 110 | 153 | IPR001841 | - | |
Dere05g0795 | 168 | SUPERFAMILY | RING/U-box | 110 | 161 | - | - | |
Dere05g0795 | 168 | PANTHER | RING-H2 FINGER PROTEIN ATL78 | 24 | 161 | IPR044602 | GO:0016567|GO:0016740 | |
Dere05g0795 | 168 | SMART | ring_2 | 111 | 152 | IPR001841 | - | |
Dere05g0795 | 168 | SMART | FANCL_C_2 | 107 | 160 | - | - | |
Dere05g0795 | 168 | ProSiteProfiles | Zinc finger RING-type profile. | 111 | 153 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere05g0795 | Dere-ChrDere05 | 13462790 | 13463296 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere05g0795 | 1 | 162 | C3H Transcription Factor Family | AT3G10910 | 61.404 | 3.09e-63 | 191 |