Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0786 ATGGCTTCTTCTACTTCTTCACCAAATTGGGTCATGGAAAATGGGGTTATGCCCCATGTATTAGCTGTTGATGACAACCTCATTGACCGCAAACTCGTTGAGAAGCTCCTCAGGAATTCTTCTTGTAAAGTGACAACTGCAGAAAATGGACCAAGGGCATTGGAGTTCTTGGGGTTGGCAAGTGATGAAGAAAGCACCTTGAAGGGCACTGGATCCAAAGTGAATATGATTATCACAGACTATTGTATGCCTGGGATGACAGGATATGAGCTACTGAAGAAAATAAAGGAATCATCAATCATGAAGGAGGTCCCTGTGGTGATCATGTCATCTGAGAACATCCCAACTCGGATCAACAAGTGTTTGGAGGAAGGAGCTCAGATGTTCATCCAAAAGCCACTCAAACAATCTGATGTAAAGAAGCTGACATGTCAACTAATGAACTGCAGAGGCTAG 456 0.4342 MASSTSSPNWVMENGVMPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALEFLGLASDEESTLKGTGSKVNMIITDYCMPGMTGYELLKKIKESSIMKEVPVVIMSSENIPTRINKCLEEGAQMFIQKPLKQSDVKKLTCQLMNCRG 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0786 151 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 146 IPR045279 GO:0009736
Dere05g0786 151 CDD REC_typeA_ARR 20 142 - -
Dere05g0786 151 FunFam Two-component response regulator ORR5 18 149 - -
Dere05g0786 151 SMART REC_2 18 143 IPR001789 GO:0000160
Dere05g0786 151 ProSiteProfiles Response regulatory domain profile. 19 147 IPR001789 GO:0000160
Dere05g0786 151 SUPERFAMILY CheY-like 17 147 IPR011006 -
Dere05g0786 151 Gene3D - 16 149 - -
Dere05g0786 151 Pfam Response regulator receiver domain 20 141 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0786 Dere-ChrDere05 13354786 13355605 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0786 19 150 Response Regulator Gene Family AT3G56380 74.436 1.47e-67 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dere05g0786 Response_reg 5.9e-22 CL0304